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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06229 Canola plastid 94.57 94.57
VIT_08s0032g00800.t01 Wine grape cytosol 69.1 87.91
AT1G06820.1 Thale cress cytosol 87.44 86.55
GSMUA_Achr8P26670_001 Banana cytosol 74.19 82.92
Os11t0572700-01 Rice plastid 75.72 76.11
EES08717 Sorghum plastid 75.21 75.47
Zm00001d052932_P001 Maize plastid 74.87 75.13
Solyc10g081650.1.1 Tomato plastid 78.44 75.12
Zm00001d007502_P001 Maize plastid 74.53 75.04
PGSC0003DMT400072543 Potato cytosol 78.27 74.96
KRH72050 Soybean plastid 76.74 74.34
KRH32922 Soybean plastid 76.06 73.56
TraesCS1A01G071700.1 Wheat mitochondrion 73.51 73.51
TraesCS1B01G090300.1 Wheat mitochondrion 73.68 73.31
HORVU1Hr1G015490.5 Barley plastid 73.68 73.31
TraesCS1D01G074300.1 Wheat plastid 72.84 73.08
Bra027908.1-P Field mustard plastid 28.01 28.21
Protein Annotations
KEGG:00906+5.2.1.13Gene3D:3.50.50.60MapMan:9.1.6.1.7InterPro:Amino_oxidaseEnsemblPlantsGene:Bra031539EnsemblPlants:Bra031539.1
EnsemblPlants:Bra031539.1-PInterPro:CRTISOInterPro:FAD/NAD-bd_sfGO:GO:0003674GO:GO:0003824GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009662GO:GO:0009987GO:GO:0016043
GO:GO:0016117GO:GO:0016491GO:GO:0046608GO:GO:0055114InterPro:IPR036188UniProt:M4ERW2
PFAM:PF01593PANTHER:PTHR10668PANTHER:PTHR10668:SF104SUPFAM:SSF51905TIGRFAMs:TIGR02730UniParc:UPI0002543452
SEG:seg:::::
Description
AT1G06820 (E=3e-256) CRTISO, CCR2 | CRTISO (CAROTENOID ISOMERASE); carotenoid isomerase
Coordinates
chrA09:+:35917308..35920414
Molecular Weight (calculated)
64625.0 Da
IEP (calculated)
7.350
GRAVY (calculated)
-0.080
Length
589 amino acids
Sequence
(BLAST)
001: MNLCLHNPVT CADRSSSLFS ALKTSNNKLG TSKFGFLKNR KKNHVVAVRS VSSTAVEERT KRESGGGESK VYDAIVIGSG IGGLVAATQL AVKEAKVLVL
101: EKYLIPGGSS GYYERDGYTF DVGSSVMFGF SDKGNLNLIT QALKAVGREM EVIPDPTTVH FHLPNDLSVQ VHREYDEFVN ELISKFPHEK EGILGFYGIC
201: WKIFNSLNSL ELKSLEEPIY LFGQFFQKPL ECLTLAYYLP QNAGDIARKY IKDPQLLSFI DAECFIVSTV NALQTPMINA SMVLCDRHYG GINYPVGGVG
301: GIARSLAGGL VDQGSEILYK ANVKSIILDD GKAVGVRLAD GREFFAKTII SNATRWDTFG KLLKGEKLPK EEENFQKVYV KAPSFLSIHM GVKAEVLPPD
401: TDCHHFVLED DWKNLEEPYG SIFLSIPTIL DPSLAPDGRH ILHIFTTSSI EDWEGLTPKE YEAKKEEVAA GIIQRLEKKL FPGLSSSITF KEVGTPRTHR
501: RYLARDKGTY GPMPRGTPKG LLGMPFNTTA IDGLYCVGDS CFPGQGVIAV AFSGVMCAHR VAADIGLERK SKVLDAGLLG LLGWLRTLA
Best Arabidopsis Sequence Match ( AT1G06820.1 )
(BLAST)
001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
Arabidopsis Description
CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.