Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY06229 | Canola | plastid | 94.57 | 94.57 |
VIT_08s0032g00800.t01 | Wine grape | cytosol | 69.1 | 87.91 |
AT1G06820.1 | Thale cress | cytosol | 87.44 | 86.55 |
GSMUA_Achr8P26670_001 | Banana | cytosol | 74.19 | 82.92 |
Os11t0572700-01 | Rice | plastid | 75.72 | 76.11 |
EES08717 | Sorghum | plastid | 75.21 | 75.47 |
Zm00001d052932_P001 | Maize | plastid | 74.87 | 75.13 |
Solyc10g081650.1.1 | Tomato | plastid | 78.44 | 75.12 |
Zm00001d007502_P001 | Maize | plastid | 74.53 | 75.04 |
PGSC0003DMT400072543 | Potato | cytosol | 78.27 | 74.96 |
KRH72050 | Soybean | plastid | 76.74 | 74.34 |
KRH32922 | Soybean | plastid | 76.06 | 73.56 |
TraesCS1A01G071700.1 | Wheat | mitochondrion | 73.51 | 73.51 |
TraesCS1B01G090300.1 | Wheat | mitochondrion | 73.68 | 73.31 |
HORVU1Hr1G015490.5 | Barley | plastid | 73.68 | 73.31 |
TraesCS1D01G074300.1 | Wheat | plastid | 72.84 | 73.08 |
Bra027908.1-P | Field mustard | plastid | 28.01 | 28.21 |
Protein Annotations
KEGG:00906+5.2.1.13 | Gene3D:3.50.50.60 | MapMan:9.1.6.1.7 | InterPro:Amino_oxidase | EnsemblPlantsGene:Bra031539 | EnsemblPlants:Bra031539.1 |
EnsemblPlants:Bra031539.1-P | InterPro:CRTISO | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009662 | GO:GO:0009987 | GO:GO:0016043 |
GO:GO:0016117 | GO:GO:0016491 | GO:GO:0046608 | GO:GO:0055114 | InterPro:IPR036188 | UniProt:M4ERW2 |
PFAM:PF01593 | PANTHER:PTHR10668 | PANTHER:PTHR10668:SF104 | SUPFAM:SSF51905 | TIGRFAMs:TIGR02730 | UniParc:UPI0002543452 |
SEG:seg | : | : | : | : | : |
Description
AT1G06820 (E=3e-256) CRTISO, CCR2 | CRTISO (CAROTENOID ISOMERASE); carotenoid isomerase
Coordinates
chrA09:+:35917308..35920414
Molecular Weight (calculated)
64625.0 Da
IEP (calculated)
7.350
GRAVY (calculated)
-0.080
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCLHNPVT CADRSSSLFS ALKTSNNKLG TSKFGFLKNR KKNHVVAVRS VSSTAVEERT KRESGGGESK VYDAIVIGSG IGGLVAATQL AVKEAKVLVL
101: EKYLIPGGSS GYYERDGYTF DVGSSVMFGF SDKGNLNLIT QALKAVGREM EVIPDPTTVH FHLPNDLSVQ VHREYDEFVN ELISKFPHEK EGILGFYGIC
201: WKIFNSLNSL ELKSLEEPIY LFGQFFQKPL ECLTLAYYLP QNAGDIARKY IKDPQLLSFI DAECFIVSTV NALQTPMINA SMVLCDRHYG GINYPVGGVG
301: GIARSLAGGL VDQGSEILYK ANVKSIILDD GKAVGVRLAD GREFFAKTII SNATRWDTFG KLLKGEKLPK EEENFQKVYV KAPSFLSIHM GVKAEVLPPD
401: TDCHHFVLED DWKNLEEPYG SIFLSIPTIL DPSLAPDGRH ILHIFTTSSI EDWEGLTPKE YEAKKEEVAA GIIQRLEKKL FPGLSSSITF KEVGTPRTHR
501: RYLARDKGTY GPMPRGTPKG LLGMPFNTTA IDGLYCVGDS CFPGQGVIAV AFSGVMCAHR VAADIGLERK SKVLDAGLLG LLGWLRTLA
101: EKYLIPGGSS GYYERDGYTF DVGSSVMFGF SDKGNLNLIT QALKAVGREM EVIPDPTTVH FHLPNDLSVQ VHREYDEFVN ELISKFPHEK EGILGFYGIC
201: WKIFNSLNSL ELKSLEEPIY LFGQFFQKPL ECLTLAYYLP QNAGDIARKY IKDPQLLSFI DAECFIVSTV NALQTPMINA SMVLCDRHYG GINYPVGGVG
301: GIARSLAGGL VDQGSEILYK ANVKSIILDD GKAVGVRLAD GREFFAKTII SNATRWDTFG KLLKGEKLPK EEENFQKVYV KAPSFLSIHM GVKAEVLPPD
401: TDCHHFVLED DWKNLEEPYG SIFLSIPTIL DPSLAPDGRH ILHIFTTSSI EDWEGLTPKE YEAKKEEVAA GIIQRLEKKL FPGLSSSITF KEVGTPRTHR
501: RYLARDKGTY GPMPRGTPKG LLGMPFNTTA IDGLYCVGDS CFPGQGVIAV AFSGVMCAHR VAADIGLERK SKVLDAGLLG LLGWLRTLA
001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
Arabidopsis Description
CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.