CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007502_P001	Maize	plastid	88.25	88.55
Os11t0572700-01	Rice	plastid	86.2	86.35
TraesCS1D01G074300.1	Wheat	plastid	83.99	83.99
TraesCS1B01G090300.1	Wheat	mitochondrion	84.5	83.78
TraesCS1A01G071700.1	Wheat	mitochondrion	83.65	83.36
GSMUA_Achr8P26670_001	Banana	cytosol	73.94	82.35
VIT_08s0032g00800.t01	Wine grape	cytosol	64.91	82.29
HORVU1Hr1G015490.5	Barley	plastid	82.96	82.26
CDY06229	Canola	plastid	75.81	75.55
Bra031539.1-P	Field mustard	plastid	75.47	75.21
CDY09954	Canola	plastid	75.3	74.92
AT1G06820.1	Thale cress	cytosol	75.13	74.12
KRH72050	Soybean	plastid	73.08	70.56
KRH32922	Soybean	plastid	73.08	70.44
PGSC0003DMT400072543	Potato	cytosol	73.76	70.41
Solyc10g081650.1.1	Tomato	plastid	73.25	69.92
EER90543	Sorghum	mitochondrion, plastid	28.45	28.11

Protein Annotations

KEGG:00906+5.2.1.13	Gene3D:3.50.50.60	EntrezGene:8071947	MapMan:9.1.6.1.7	InterPro:Amino_oxidase	UniProt:C5Y4W1
InterPro:CRTISO	ncoils:Coil	EnsemblPlants:EES08717	ProteinID:EES08717	ProteinID:EES08717.1	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009662	GO:GO:0009987	GO:GO:0016043
GO:GO:0016117	GO:GO:0016491	GO:GO:0046608	GO:GO:0055114	InterPro:IPR036188	PFAM:PF01593
PANTHER:PTHR10668	PANTHER:PTHR10668:SF104	MetaCyc:PWY-6475	EnsemblPlantsGene:SORBI_3005G160500	SUPFAM:SSF51905	unigene:Sbi.7284
TIGRFAMs:TIGR02730	UniParc:UPI0001A86603	RefSeq:XP_002449729.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:63418383..63424080

Molecular Weight (calculated)

63824.1 Da

IEP (calculated)

7.207

GRAVY (calculated)

-0.036

Length

587 amino acids

Sequence
(BLAST)

001: MPPLAARVHA PILLAPVAPH PATRLCASSG PRGGVGGFRR GALASEKPQA VAVAEKAGGE VGGGEGEGPY DAIVIGSGIG GLVAATQLAA KGARVLVLEK
101: YLIPGGSSGY YRRDGFTFDV GSSVMFGFSD KGNLNLITQA LEAVGRKMEV LPDPSTVHFH LPGDLSVLVH RKYEDFINEL ISKFPHEKEG ILKFYDTCWK
201: IFNSLNSLEL KSLEEPLYLF GQFFQKPLEC LTLAYYLPQN AGDIARKFIK DQELLSFIDA ECFIVSTVNA LQTPMINASM VLCDRHFGGI NYPVGGVGGI
301: AISLADGLVE KGSEIRYKAN VTNVILENGK AVGVRLSNGK EFFAKTVISN ATRWDTFGKL LKEKELPEEE KNFQKNYVKA PSFLSIHMGV KASVLPAGTD
401: CHHFVLEDNW NNLEKSYGSI FLSIPTVLDP SLAPEGHHIL HVFTTAGIED WEGLSRKEYE EKKEEVANEI IRRLEKKLFP GLQDSIVLKE VGSPKTHRRF
501: LARNDGTYGP MPRGKPKGLL AMPFNTTSID GLYCVGDSCF PGQGVIAVAF SGIMCAHRVA ADIGLEQKSP VLDAGLLGLL RWFRTLA

Best Arabidopsis Sequence Match ( AT1G06820.1 )
(BLAST)

001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA

Arabidopsis Description

CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.