Factsheet for VIT_08s0032g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26670_001	Banana	cytosol	86.61	76.09
CDY09954	Canola	plastid	88.12	69.15
Bra031539.1-P	Field mustard	plastid	87.91	69.1
CDY06229	Canola	plastid	87.69	68.93
AT1G06820.1	Thale cress	cytosol	88.55	68.91
KRH72050	Soybean	plastid	88.34	67.27
KRH32922	Soybean	plastid	88.12	67.0
Os11t0572700-01	Rice	plastid	83.8	66.21
PGSC0003DMT400072543	Potato	cytosol	87.26	65.69
Solyc10g081650.1.1	Tomato	plastid	87.26	65.69
EES08717	Sorghum	plastid	82.29	64.91
TraesCS1D01G074300.1	Wheat	plastid	82.07	64.74
Zm00001d007502_P001	Maize	plastid	81.64	64.62
Zm00001d052932_P001	Maize	plastid	81.86	64.57
TraesCS1B01G090300.1	Wheat	mitochondrion	82.07	64.19
TraesCS1A01G071700.1	Wheat	mitochondrion	81.64	64.18
HORVU1Hr1G015490.5	Barley	plastid	81.86	64.02
VIT_12s0035g01080.t01	Wine grape	plastid	28.29	22.98

Protein Annotations

KEGG:00906+5.2.1.13	EntrezGene:100263250	wikigene:100263250	Gene3D:3.50.50.60	MapMan:9.1.6.1.7	InterPro:Amino_oxidase
ProteinID:CBI39106	ProteinID:CBI39106.3	InterPro:CRTISO	UniProt:D7U8P2	InterPro:FAD/NAD-bd_sf	EMBL:FN596742
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016117	GO:GO:0016491
GO:GO:0046608	GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100263250	wikigene:LOC100263250	PFAM:PF01593
PANTHER:PTHR10668	PANTHER:PTHR10668:SF104	SUPFAM:SSF51905	TIGR:TC62553	TIGRFAMs:TIGR02730	UniParc:UPI0001BE4CE0
ArrayExpress:VIT_08s0032g00800	EnsemblPlantsGene:VIT_08s0032g00800	EnsemblPlants:VIT_08s0032g00800.t01	unigene:Vvi.4262	RefSeq:XP_002269554	RefSeq:XP_002269554.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:4369834..4386475

Molecular Weight (calculated)

51424.6 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.015

Length

463 amino acids

Sequence
(BLAST)

001: MFGFSDKGNL NLITQALEAV GCKMQVIPDP TTVHFHLPSN LSVRVHRQYG EFIAELTKNF PHEKEGILKF YNECWKIFNA LNSLELKSLE EPIYLFGQFF
101: QKPLECLTLA YYLPQNAGDI ARKYIKDPQL LSFIDAECFI VSTVNALQTP MINASMVLCD RHFGGINYPV GGVGGIAKSL AKGLVENGSE ILYKANVTSI
201: ILAQGKAVGV KLSDGREFFA KTIVSNATRW DTFGKLLKGE ELPKEEVNFQ KVYVKAPSFL SIHMGVKAEV LPPDTDCHHF VLENDWSRLE EPYGSIFLSI
301: PTMLDASLAP EGRHILHIFT TSPIEDWKGL PLKDYEAKKE LVADEIISRL EKKLFPGLKS SIVFKEVGTP KTHRRYLARD NGTYGPMPRR TPKGLLGMPF
401: NTTAIHGLYC VGDSCFPGQG VIAVAFSGVM CAHRVAADIG LEKKSPVLDA ALLRLLGWLR TLA

Best Arabidopsis Sequence Match ( AT1G06820.1 )
(BLAST)

001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA

Arabidopsis Description

CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.