Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0032g00800.t01 | Wine grape | cytosol | 68.91 | 88.55 |
| Bra031539.1-P | Field mustard | plastid | 86.55 | 87.44 |
| CDY06229 | Canola | plastid | 85.71 | 86.59 |
| CDY09954 | Canola | plastid | 84.2 | 84.92 |
| GSMUA_Achr8P26670_001 | Banana | cytosol | 73.11 | 82.54 |
| KRH72050 | Soybean | plastid | 77.31 | 75.66 |
| Solyc10g081650.1.1 | Tomato | plastid | 78.15 | 75.61 |
| PGSC0003DMT400072543 | Potato | cytosol | 77.98 | 75.45 |
| EES08717 | Sorghum | plastid | 74.12 | 75.13 |
| KRH32922 | Soybean | plastid | 76.81 | 75.04 |
| Os11t0572700-01 | Rice | plastid | 73.78 | 74.91 |
| Zm00001d052932_P001 | Maize | plastid | 73.61 | 74.62 |
| Zm00001d007502_P001 | Maize | plastid | 72.77 | 74.02 |
| TraesCS1D01G074300.1 | Wheat | plastid | 72.27 | 73.25 |
| TraesCS1A01G071700.1 | Wheat | mitochondrion | 72.44 | 73.17 |
| TraesCS1B01G090300.1 | Wheat | mitochondrion | 72.77 | 73.14 |
| HORVU1Hr1G015490.5 | Barley | plastid | 72.61 | 72.97 |
| AT1G57770.1 | Thale cress | plastid | 27.23 | 28.22 |
Protein Annotations
| KEGG:00906+5.2.1.13 | Gene3D:3.50.50.60 | EntrezGene:837193 | MapMan:9.1.6.1.7 | ProteinID:AAF63149.1 | ProteinID:AEE28042.1 |
| ArrayExpress:AT1G06820 | EnsemblPlantsGene:AT1G06820 | RefSeq:AT1G06820 | TAIR:AT1G06820 | RefSeq:AT1G06820-TAIR-G | EnsemblPlants:AT1G06820.1 |
| TAIR:AT1G06820.1 | InterPro:Amino_oxidase | EMBL:BX813870 | InterPro:CRTISO | Symbol:CRTISO | InterPro:FAD/NAD-bd_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009662 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016117 | GO:GO:0016491 |
| GO:GO:0016853 | GO:GO:0031969 | GO:GO:0046608 | GO:GO:0055114 | InterPro:IPR036188 | RefSeq:NP_172167.2 |
| PFAM:PF01593 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10668 | PANTHER:PTHR10668:SF104 | UniProt:Q9M9Y8 | SUPFAM:SSF51905 | TIGRFAMs:TIGR02730 |
| UniParc:UPI000034F3C0 | SEG:seg | : | : | : | : |
Description
CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
Coordinates
chr1:-:2092946..2096784
Molecular Weight (calculated)
65432.2 Da
IEP (calculated)
8.239
GRAVY (calculated)
-0.078
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.