CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72050	Soybean	plastid	91.46	91.61
VIT_08s0032g00800.t01	Wine grape	cytosol	67.0	88.12
GSMUA_Achr8P26670_001	Banana	cytosol	70.77	81.78
AT1G06820.1	Thale cress	cytosol	75.04	76.81
Bra031539.1-P	Field mustard	plastid	73.56	76.06
CDY06229	Canola	plastid	73.4	75.89
CDY09954	Canola	plastid	72.91	75.25
Os11t0572700-01	Rice	plastid	70.94	73.72
Zm00001d052932_P001	Maize	plastid	70.77	73.42
PGSC0003DMT400072543	Potato	cytosol	74.06	73.33
Solyc10g081650.1.1	Tomato	plastid	73.89	73.17
EES08717	Sorghum	plastid	70.44	73.08
Zm00001d007502_P001	Maize	plastid	69.62	72.48
HORVU1Hr1G015490.5	Barley	plastid	70.28	72.3
TraesCS1D01G074300.1	Wheat	plastid	69.62	72.23
TraesCS1A01G071700.1	Wheat	mitochondrion	69.62	71.99
TraesCS1B01G090300.1	Wheat	mitochondrion	69.79	71.79
KRH51300	Soybean	mitochondrion, plastid	25.62	27.96
KRH01865	Soybean	plastid	5.75	17.24

Protein Annotations

KEGG:00906+5.2.1.13	EntrezGene:100811616	Gene3D:3.50.50.60	MapMan:9.1.6.1.7	UniProt:A0A0R0HQY2	EMBL:ACUP02006204
InterPro:Amino_oxidase	InterPro:CRTISO	ncoils:Coil	InterPro:FAD/NAD-bd_sf	EnsemblPlantsGene:GLYMA_10G086700	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016117	GO:GO:0016491	GO:GO:0046608
GO:GO:0055114	InterPro:IPR036188	EnsemblPlants:KRH32922	ProteinID:KRH32922	ProteinID:KRH32922.1	PFAM:PF01593
PANTHER:PTHR10668	PANTHER:PTHR10668:SF104	MetaCyc:PWY-6475	SUPFAM:SSF51905	TIGRFAMs:TIGR02730	UniParc:UPI000233D3D3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:11167597..11174503

Molecular Weight (calculated)

66836.4 Da

IEP (calculated)

6.716

GRAVY (calculated)

-0.053

Length

609 amino acids

Sequence
(BLAST)

001: MLNSSFLTVS EHTFSHTPHH FPTRASSQSP NLQPQFQSLA FANHVVSEFP SGSCSNAPRR KGVLAVRSKS TLGVEEVVAE GGGVKGKGEE EFDAIVIGSG
101: IGGLVAGTQL AVKGARVLVL EKYVIPGGSS GFYQRDGYTF DVGSSVMFGF SDKGNLNLIT QALEAVGCRM QVVPDPTTVY FHLPNNLSVR VHKEYDKFTE
201: ELTSYFPHEK EGILKFYGEC WKIFDALNSL ELKSLEEPLY LFGQFFQKPL ECLTLAYYLP QNAGAIARKY IQDPQLLSFI DAECFIVSTV NALQTPMINA
301: AMVLCDRHFG GINYPLGGVG GIAKSLAKGL VDQGSEIAYK ANVTSIIIEQ GKAVGVRLSN GREFFAKTII SNATRWDTFG KLLKDIPLPK EEENFQKVYV
401: KAPSFLSIHM GVKAEVLPPD TDCHHFVLES NWSKLEEPYG SIFLSIPTVL DSSLAPEGRH ILHIFTTSSV EDWEGLSRAD YEAKKQLVAD EITSRLENKL
501: FPGLRSSIDF MEVGTPKTHR RYLARDEGTY GPMPRRIPKG LLGMPFNTTG IDGLYCVGDS CFPGQGVIAV AFSGVMCAHR VAADIGLEKK SPVLDSMLLR
601: LLGWLRTMA

Best Arabidopsis Sequence Match ( AT1G06820.1 )
(BLAST)

001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA

Arabidopsis Description

CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.