CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G037300.2	Barley	cytosol	10.22	81.43
KRH01865	Soybean	plastid	29.21	80.3
PGSC0003DMT400064585	Potato	plastid	78.14	77.58
GSMUA_Achr8P08430_001	Banana	peroxisome	73.66	77.55
HORVU5Hr1G047900.5	Barley	cytosol, mitochondrion, plastid	19.18	77.54
VIT_12s0035g01080.t01	Wine grape	plastid	78.85	77.19
Solyc05g010180.2.1	Tomato	plastid	77.6	76.23
AT1G57770.1	Thale cress	plastid	77.78	75.61
CDX95296	Canola	plastid	78.14	75.56
Bra027908.1-P	Field mustard	plastid	78.49	74.87
CDY39935	Canola	plastid	78.49	74.87
HORVU5Hr1G119790.1	Barley	plastid	73.66	72.49
TraesCS5D01G528500.1	Wheat	plastid	73.12	70.1
TraesCSU01G062000.1	Wheat	plastid	73.48	70.09
TraesCS5B01G529400.1	Wheat	plastid	73.3	69.91
TraesCS1A01G407600.1	Wheat	plastid	72.76	69.4
EER90543	Sorghum	mitochondrion, plastid	73.84	69.36
Zm00001d012868_P001	Maize	plastid	74.55	68.87
Os03t0841900-00	Rice	plasma membrane	75.81	65.58
KRH32922	Soybean	plastid	27.96	25.62
KRH72050	Soybean	plastid	27.78	25.49

Protein Annotations

EntrezGene:100810986	Gene3D:3.50.50.60	MapMan:35.1	EMBL:ACUP02004733	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
EnsemblPlantsGene:GLYMA_07G273600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1KNT0	InterPro:IPR036188
EnsemblPlants:KRH51300	ProteinID:KRH51300	ProteinID:KRH51300.1	PFAM:PF01593	PANTHER:PTHR10668	PANTHER:PTHR10668:SF84
SUPFAM:SSF51905	UniParc:UPI0002337C22	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:44541134..44544824

Molecular Weight (calculated)

60669.0 Da

IEP (calculated)

7.199

GRAVY (calculated)

-0.013

Length

558 amino acids

Sequence
(BLAST)

001: MIVSMMGGRC YSSYRSNAVA AVMRDRKWKS NSKSEEADVV VIGSGIGGLC CGALLARYEE DVLVLESHDQ PGGAAHSFDI KGYNFDSGPS LFSGLQSRGP
101: QANPLAQVLD ALGESLPCAT YDSWMVHIPE GQFLSRIGPT EFFKDLQQYA GPNAVLEWRK LLDAVLPLST AAMALPPLSI RGDLGVLSTA AARYAPSLFK
201: SFLQMGPRAS LRATKLLRPF SEILDDLQLN DPFIRNWIDL LSFLLAGVKA NAVLSAEMIY MFAEWYKPGC CLEYPLHGSA AIIDALVRGL EKFGGRISLQ
301: SHVENIVVEN DRAIGVKLGS GQFIRAKKAV VSNASMWDTL KLLPKEVVPK SYSDRVNTTP QCDSFMHLHL GFDAEGIRSD LGIHHIVVND WKRGVDADQN
401: VVLISIPSVL SPNLAPHGKH VLHAYMPGTE PFELWEGLDR RSAEYRNLKA ERSEVMWKAV ERAVGTGFSR EKCEVKLVGS PLTHERFLRR NRGTYGPAVQ
501: AGSDAFPGHS TPIAQLYCCG DSTFPGIGVP AVAASGAIVA NSLVSVSQHS KLLDAIGI

Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)

001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

Arabidopsis Description

FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.