CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G037300.2	Barley	cytosol	10.77	91.43
HORVU5Hr1G047900.5	Barley	cytosol, mitochondrion, plastid	20.2	86.96
Zm00001d012868_P001	Maize	plastid	88.05	86.59
HORVU5Hr1G119790.1	Barley	plastid	80.3	84.13
GSMUA_Achr8P08430_001	Banana	peroxisome	74.41	83.4
TraesCS5D01G528500.1	Wheat	plastid	81.48	83.16
TraesCS5B01G529400.1	Wheat	plastid	81.65	82.91
TraesCSU01G062000.1	Wheat	plastid	81.31	82.56
TraesCS1A01G407600.1	Wheat	plastid	81.14	82.39
Os03t0841900-00	Rice	plasma membrane	83.33	76.74
PGSC0003DMT400064585	Potato	plastid	72.22	76.33
VIT_12s0035g01080.t01	Wine grape	plastid	72.22	75.26
Solyc05g010180.2.1	Tomato	plastid	71.38	74.65
KRH51300	Soybean	mitochondrion, plastid	69.36	73.84
AT1G57770.1	Thale cress	plastid	70.88	73.34
CDX95296	Canola	plastid	71.21	73.31
CDY39935	Canola	plastid	71.55	72.65
Bra027908.1-P	Field mustard	plastid	71.55	72.65
KRH01865	Soybean	plastid	23.06	67.49
EES08717	Sorghum	plastid	28.11	28.45

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	EntrezGene:8080169	InterPro:Amino_oxidase	UniProt:C5WT16	EnsemblPlants:EER90543
ProteinID:EER90543	ProteinID:EER90543.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	PFAM:PF01593	PANTHER:PTHR10668
PANTHER:PTHR10668:SF84	EnsemblPlantsGene:SORBI_3001G018000	SUPFAM:SSF51905	UniParc:UPI0001A82553	RefSeq:XP_002463545.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:1518766..1525254

Molecular Weight (calculated)

63562.8 Da

IEP (calculated)

8.213

GRAVY (calculated)

0.003

Length

594 amino acids

Sequence
(BLAST)

001: MAASALAFRA LRPPHGRHAA APSPRPRPRA CSATAAAPRA RCRAVAADER PADPAFPEGQ NRGISGAVER PEADVVVIGS GLGGLCCAGL LARYGQDVLV
101: LESHDRPGGA AHSFDIKGFS FDSGPSLFSG FQSRGPQANP LAQVLDALGQ SVPCASYDSW MVYVPEGQFL SRIGPTEFLK DLEMFVGVDA VQEWKKLLDA
201: VIPMSAAAMA LPPLSIRGDL GILSTAAGRY APSLLKSFIQ MGPQGALGAT KLLRPFKEIV DSLGLKNPFV RNWIDLLCFL LAGVKSDGAL SAEMVYMFAE
301: WYKPGCLLEY PLGGTGAIID ALVSGIEKFG GRLALRSHVE KILIENGRAV GVKLQSGQVV RAKKAVVSNA SMWDTLDLLP PNVVPKSYED RVKATPQCES
401: FMHLHLGFDA KNAREDLGIH HIVVDDWSKG VDGEQNVVLI SVPSVLSKDL APPGKHILHA YTPGTEPFSL WEGLDRKSAE YRRLKEERSE VMWKAVELAL
501: GPKFSRERCD VKLVGTPLTH KRFLRRNRGT YGPAIKAGEA TFPGQATPIP QLFCCGDSTF PGIGVPAVAA SGAIVANTLV PVSQHSELLD AVGI

Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)

001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

Arabidopsis Description

FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.