Factsheet for Os03t0841900-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G037300.2	Barley	cytosol	10.08	92.86
HORVU5Hr1G047900.5	Barley	cytosol, mitochondrion, plastid	18.45	86.23
HORVU5Hr1G119790.1	Barley	plastid	74.11	84.3
GSMUA_Achr8P08430_001	Banana	peroxisome	68.84	83.77
EER90543	Sorghum	mitochondrion, plastid	76.74	83.33
TraesCS5D01G528500.1	Wheat	plastid	74.42	82.47
Zm00001d012868_P001	Maize	plastid	76.74	81.95
TraesCS5B01G529400.1	Wheat	plastid	74.26	81.88
TraesCS1A01G407600.1	Wheat	plastid	74.11	81.71
TraesCSU01G062000.1	Wheat	plastid	73.95	81.54
PGSC0003DMT400064585	Potato	plastid	66.82	76.69
KRH51300	Soybean	mitochondrion, plastid	65.58	75.81
Solyc05g010180.2.1	Tomato	plastid	66.51	75.53
VIT_12s0035g01080.t01	Wine grape	plastid	66.36	75.09
CDX95296	Canola	plastid	66.82	74.7
AT1G57770.1	Thale cress	plastid	65.89	74.04
CDY39935	Canola	plastid	67.13	74.02
Bra027908.1-P	Field mustard	plastid	67.13	74.02
KRH01865	Soybean	plastid	21.24	67.49
Os11t0572700-01	Rice	plastid	25.89	28.5

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A0P0W5A9	InterPro:Amino_oxidase	ProteinID:BAS87303.1	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036188	EnsemblPlantsGene:Os03g0841900	EnsemblPlants:Os03t0841900-00	PFAM:PF01593	PANTHER:PTHR10668	PANTHER:PTHR10668:SF84
SUPFAM:SSF51905	UniParc:UPI000393BB69	SEG:seg	:	:	:

Description

Similar to carotenoid isomerase 1. (Os03t0841900-00)

Coordinates

chr3:-:35393753..35398295

Molecular Weight (calculated)

69700.3 Da

IEP (calculated)

10.033

GRAVY (calculated)

-0.161

Length

645 amino acids

Sequence
(BLAST)

001: MGLASHLLHV SRERSGRLPR KEKGRRSATC PRRPPHSNRG LIPKLCGVAG ETRAILRLRH GFRRLGLPRA AASAPPLRSP PARSTDHRPT ATTRMRGRRS
101: SRALQGGGRR RAPRGPREAE RPEADVVVIG SGIGGLCCAG LLARYNQDVL VLESHDRPGG AAHSFDIKGF NFDSGPSLFS GFQSRGPQAN PLAQVLDALG
201: ESVPCASYDS WMVYVPEGQF LSRIGPTDFL KDLDEFVGAD AVQEWKKLLD AVIPISAAAM ALPPLSIRGD LGVLSTSAGR YAPSLLKSIL QMGPQGALGA
301: TKLLRPFSEI VDSLGLKNPF VRNWIDLLCF LLAGVKSDGA LSAEMVYMFA EWYKPGCSLE YPLEGSGAII DALVRGIKKF GGRLALRSHV EKILIENGRA
401: VGVKLQSGQI VRARKAVVSN ASMWDTLDLL PPDAVPRSYQ DKVKATPQCE SFMHLHLGFD VENAREDLGI HHIVVNDWNK GVDADQNVVL ISVPTVLGNG
501: LAPPGKHVLH AYTPGTEPFS LWEGLDRKSA EYRRLKEERS EVMWKAVELA LGPRFSREKC DVKLVGSPLT HKRFLRRNRG TYGPAIKAGE ATFPGQATPI
601: PQLFCCGDST FPGIGVPAVA ASGAIVANTL VSVSQHSELL DAVGI

Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)

001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

Arabidopsis Description

FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.