CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027908.1-P	Field mustard	plastid	99.66	99.66
CDX95296	Canola	plastid	92.82	94.11
AT1G57770.1	Thale cress	plastid	87.52	89.2
HORVU5Hr1G037300.2	Barley	cytosol	9.74	81.43
Solyc05g010180.2.1	Tomato	plastid	78.46	80.81
GSMUA_Achr8P08430_001	Banana	peroxisome	72.99	80.57
PGSC0003DMT400064585	Potato	plastid	77.27	80.43
KRH51300	Soybean	mitochondrion, plastid	74.87	78.49
VIT_12s0035g01080.t01	Wine grape	plastid	75.9	77.89
HORVU5Hr1G047900.5	Barley	cytosol, mitochondrion, plastid	17.78	75.36
HORVU5Hr1G119790.1	Barley	plastid	72.31	74.6
TraesCS5B01G529400.1	Wheat	plastid	72.82	72.82
TraesCSU01G062000.1	Wheat	plastid	72.65	72.65
TraesCS5D01G528500.1	Wheat	plastid	72.14	72.51
TraesCS1A01G407600.1	Wheat	plastid	72.48	72.48
EER90543	Sorghum	mitochondrion, plastid	72.65	71.55
KRH01865	Soybean	plastid	24.79	71.43
Zm00001d012868_P001	Maize	plastid	72.65	70.36
Os03t0841900-00	Rice	plasma membrane	74.02	67.13
CDY09954	Canola	plastid	28.21	27.97
CDY06229	Canola	plastid	27.69	27.5

Protein Annotations

EnsemblPlants:CDY39935	EnsemblPlantsGene:GSBRNA2T00068806001	Gene3D:3.50.50.60	GO:A0A078HN33	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR10668	PANTHER:PTHR10668:SF84	PFAM:PF01593	ProteinID:CDY39935	ProteinID:CDY39935.1
SEG:seg	SUPFAM:SSF51905	UniParc:UPI0004EE3756	UniProt:A0A078HN33	MapMan:35.1	:

Description

BnaA09g15170DBnaA09g15170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN33]

Coordinates

chrLK032460:+:259407..262430

Molecular Weight (calculated)

62971.1 Da

IEP (calculated)

7.112

GRAVY (calculated)

0.028

Length

585 amino acids

Sequence
(BLAST)

001: MILSLSPPMA SSFCGWTLQL PFLSNFRRPT VRSRFIRASS SSSTSSNGNL PIKKSFPGEP EADVVVIGSG IGGLCCGALL ARYNQDVLVL ESHDLPGGAA
101: HSFEIKGYKF DSGPSLFSGL QSRGPQANPL AQVLDALGES LPCAKYDSWM VYLPEGDFLS RIGPTDFFKD LEKYAGPNAV QEWEKLLGAI LPLSSAAMAL
201: PPLSIRGDLG VLSTAAARYA PSLLKSFIKM GPQGALGATK LLRPFLEIVD SLELKDPFIR NWIDLLAFLL AGVKSDGILS AEMIYMFAEW YKPGCTLEYP
301: IDGSGAVVEA LVRGLEKFGG RLSLKSHVEN IVIENGKAVG VKLRNGQFVR ARKAVVSNAS MWDTLKLLPP GALPDSYVAG VNTTPQCESF MHLHLGFDAK
401: EQGIADDLEI HHIVVNDWER GVDADQNVVL ISVPSVLSPN LAPPGKHVLH AYMPGTEPFS LWEGLDRKSA EYKDLKSQRS EVMWKAVERA LGPGFKREKC
501: EVSLVGTPLT HQRFLRRNRG TYGPAIEAGK GTFPGHSTPI PQLMCCGDST FPGIGVPAVA ASGAIVANSL VTVSKHSELL DAIGL

Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)

001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

Arabidopsis Description

FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.