Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G407600.1 | Wheat | plastid | 99.15 | 99.15 |
| TraesCS5B01G529400.1 | Wheat | plastid | 97.44 | 97.44 |
| TraesCS5D01G528500.1 | Wheat | plastid | 96.75 | 97.25 |
| HORVU5Hr1G037300.2 | Barley | cytosol | 11.62 | 97.14 |
| HORVU5Hr1G047900.5 | Barley | cytosol, mitochondrion, plastid | 22.56 | 95.65 |
| HORVU5Hr1G119790.1 | Barley | plastid | 90.94 | 93.83 |
| EER90543 | Sorghum | mitochondrion, plastid | 82.56 | 81.31 |
| GSMUA_Achr8P08430_001 | Banana | peroxisome | 73.33 | 80.94 |
| Zm00001d012868_P001 | Maize | plastid | 81.54 | 78.97 |
| PGSC0003DMT400064585 | Potato | plastid | 72.65 | 75.62 |
| Solyc05g010180.2.1 | Tomato | plastid | 72.48 | 74.65 |
| VIT_12s0035g01080.t01 | Wine grape | plastid | 72.14 | 74.04 |
| Os03t0841900-00 | Rice | plasma membrane | 81.54 | 73.95 |
| KRH51300 | Soybean | mitochondrion, plastid | 70.09 | 73.48 |
| CDX95296 | Canola | plastid | 72.31 | 73.31 |
| AT1G57770.1 | Thale cress | plastid | 71.62 | 73.0 |
| Bra027908.1-P | Field mustard | plastid | 72.82 | 72.82 |
| CDY39935 | Canola | plastid | 72.65 | 72.65 |
| KRH01865 | Soybean | plastid | 22.91 | 66.01 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | InterPro:Amino_oxidase | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR036188 | PFAM:PF01593 |
| PANTHER:PTHR10668 | PANTHER:PTHR10668:SF84 | SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCSU01G062000 | EnsemblPlants:TraesCSU01G062000.1 | SEG:seg |
Description
No Description!
Coordinates
chrUn:+:48421519..48429340
Molecular Weight (calculated)
61998.8 Da
IEP (calculated)
7.704
GRAVY (calculated)
0.023
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSALASPA PRPAPRGNRH PRACPAAAAA ASPVPRRLGA AARCRAVAAP AGPSPPGVAE RPEADVVVIG SGLGGLCCAG LLARYGQDVV VLESHDRPGG
101: AAHSFDVKGF HFDSGPSLFS GFQSRGPQAN PLAQVLDALG ESVPCASYDS WMVHVPEGQF ESRIGPTDFL KDLETYVGLD ATREWQKLLD AVIPISAAAM
201: ALPPLSIRGD LGILSTAAGR YAPSLLQSLI KMGPRGSLGA TKLLRPFSEI VDSLELKNPF VRNWIDLLCF LLAGVKSDSA LSAEMVYMFA EWYKPGCKLE
301: YPLGGSGAII DALVRGIEKF GGRLALNSHV EKILIENGRA VGVKLRGGQI VRAKKAVVSN ASMWDTLGLL PPDAVPRSYQ DQVKATPQCD SFMHLHLGFD
401: TECVKEDLGI HHIVVNDWDK GVDGEQNVVL ISVPSVLSEG LAPPGKHILH AYTPGTEPFG LWDGLDRKSA AYRSLKEERS EVMWKAVELA LGPKFSREKC
501: EVKLVGTPLT HKRFLRRNRG TYGPAIKAGE ATFPGQATPV PQLFCCGDST FPGIGVPAVA ASGAIVANTL VSVAQHSELL DAVGI
101: AAHSFDVKGF HFDSGPSLFS GFQSRGPQAN PLAQVLDALG ESVPCASYDS WMVHVPEGQF ESRIGPTDFL KDLETYVGLD ATREWQKLLD AVIPISAAAM
201: ALPPLSIRGD LGILSTAAGR YAPSLLQSLI KMGPRGSLGA TKLLRPFSEI VDSLELKNPF VRNWIDLLCF LLAGVKSDSA LSAEMVYMFA EWYKPGCKLE
301: YPLGGSGAII DALVRGIEKF GGRLALNSHV EKILIENGRA VGVKLRGGQI VRAKKAVVSN ASMWDTLGLL PPDAVPRSYQ DQVKATPQCD SFMHLHLGFD
401: TECVKEDLGI HHIVVNDWDK GVDGEQNVVL ISVPSVLSEG LAPPGKHILH AYTPGTEPFG LWDGLDRKSA AYRSLKEERS EVMWKAVELA LGPKFSREKC
501: EVKLVGTPLT HKRFLRRNRG TYGPAIKAGE ATFPGQATPV PQLFCCGDST FPGIGVPAVA ASGAIVANTL VSVAQHSELL DAVGI
001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
Arabidopsis Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.