Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95296 | Canola | plastid | 90.77 | 90.29 |
| Bra027908.1-P | Field mustard | plastid | 89.37 | 87.69 |
| CDY39935 | Canola | plastid | 89.2 | 87.52 |
| Solyc05g010180.2.1 | Tomato | plastid | 80.31 | 81.16 |
| PGSC0003DMT400064585 | Potato | plastid | 78.57 | 80.25 |
| GSMUA_Achr8P08430_001 | Banana | peroxisome | 74.04 | 80.19 |
| HORVU5Hr1G037300.2 | Barley | cytosol | 9.76 | 80.0 |
| VIT_12s0035g01080.t01 | Wine grape | plastid | 77.35 | 77.89 |
| KRH51300 | Soybean | mitochondrion, plastid | 75.61 | 77.78 |
| HORVU5Hr1G047900.5 | Barley | cytosol, mitochondrion, plastid | 17.94 | 74.64 |
| HORVU5Hr1G119790.1 | Barley | plastid | 73.34 | 74.25 |
| TraesCS5D01G528500.1 | Wheat | plastid | 72.82 | 71.82 |
| TraesCS5B01G529400.1 | Wheat | plastid | 73.17 | 71.79 |
| TraesCSU01G062000.1 | Wheat | plastid | 73.0 | 71.62 |
| TraesCS1A01G407600.1 | Wheat | plastid | 72.82 | 71.45 |
| KRH01865 | Soybean | plastid | 25.26 | 71.43 |
| EER90543 | Sorghum | mitochondrion, plastid | 73.34 | 70.88 |
| Zm00001d012868_P001 | Maize | plastid | 73.52 | 69.87 |
| Os03t0841900-00 | Rice | plasma membrane | 74.04 | 65.89 |
| AT1G06820.1 | Thale cress | cytosol | 28.22 | 27.23 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | EntrezGene:842152 | ProteinID:AAG29233.1 | ProteinID:AEE33463.1 | ArrayExpress:AT1G57770 |
| EnsemblPlantsGene:AT1G57770 | RefSeq:AT1G57770 | TAIR:AT1G57770 | RefSeq:AT1G57770-TAIR-G | EnsemblPlants:AT1G57770.1 | TAIR:AT1G57770.1 |
| EMBL:AY065278 | EMBL:AY133831 | InterPro:Amino_oxidase | Unigene:At.28533 | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR036188 |
| RefSeq:NP_176088.2 | PFAM:PF01593 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10668 | PANTHER:PTHR10668:SF84 | UniProt:Q9FVR9 | SUPFAM:SSF51905 | UniParc:UPI00000A6902 |
| SEG:seg | : | : | : | : | : |
Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
Coordinates
chr1:+:21395096..21398300
Molecular Weight (calculated)
61727.3 Da
IEP (calculated)
6.975
GRAVY (calculated)
0.006
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.