Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88461 | Soybean | cytosol | 11.65 | 51.49 |
| VIT_08s0105g00330.t01 | Wine grape | cytosol | 53.08 | 35.59 |
| Solyc04g076900.1.1 | Tomato | nucleus | 9.52 | 34.41 |
| KRH65727 | Soybean | cytosol | 51.29 | 33.75 |
| KRH75969 | Soybean | cytosol | 51.4 | 33.75 |
| GSMUA_Achr6P15580_001 | Banana | cytosol | 41.21 | 30.62 |
| CDY04840 | Canola | plastid | 46.58 | 28.59 |
| KXG37042 | Sorghum | cytosol | 39.42 | 28.32 |
| Os07t0693900-01 | Rice | cytosol, plastid | 38.75 | 27.79 |
| Bra028900.1-P | Field mustard | plastid | 46.81 | 27.59 |
| TraesCS2D01G082200.3 | Wheat | cytosol, plastid | 38.52 | 27.32 |
| AT5G01400.1 | Thale cress | nucleus | 44.79 | 27.27 |
| TraesCS2B01G098800.3 | Wheat | cytosol, plastid | 38.52 | 27.24 |
| HORVU2Hr1G013790.2 | Barley | cytosol | 36.28 | 27.09 |
| TraesCS2A01G084200.1 | Wheat | cytosol, plastid | 38.19 | 27.09 |
| Zm00001d022586_P001 | Maize | cytosol | 37.29 | 25.89 |
| Solyc04g076910.2.1 | Tomato | nucleus | 18.14 | 14.09 |
| Solyc09g005340.2.1 | Tomato | nucleus | 1.23 | 2.26 |
Protein Annotations
| EnsemblPlants:Solyc09g005330.2.1 | EnsemblPlantsGene:Solyc09g005330.2 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Symplekin/Pta1_N | PANTHER:PTHR15245 | PANTHER:PTHR15245:SF35 | PFAM:PF11935 |
| SEG:seg | SUPFAM:SSF48371 | UniParc:UPI000276B10C | UniProt:K4CQ23 | MapMan:16.2.1.2.9 | : |
Description
No Description!
Coordinates
chr9:+:253408..264455
Molecular Weight (calculated)
96939.1 Da
IEP (calculated)
5.168
GRAVY (calculated)
-0.144
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGMMSPISR ERIASLLNAA KFASDVPSKL HSLRRLKDEL SGAGGPLLKE FLPTLIDLVS DRFSPVRKLT IQMVGCIGFE HGELLPDIIP VLISALKDDT
101: PAVARQAITC GIGIFRCTLV KVAIQGLFSS QLDGSLESAW ALMLKFREEI YTMAFLPASD GRKLLALKFV ESVVLLYTPD PNVGSEPPPA LDIKGKFEQF
201: NVSWLRGGHP VLDIGDLSVK ASQSLGLLLD QLRSPAVKSI TNLMIIVVIK CLSEIATKRP AFYGRILPVL LSLSPARSDG NKLHVSGVYR ALKTAFISCL
301: HCKHPGAAPW RDRLEVALRE KRAGVQAGPV VSQDSQNNGD TELKDVSSIL EDSKPSIKSS SGTKRSGVEH NAELIDDNLS KKRMRSTPIV SKAPKQEPSG
401: IQERVSAGGS TTTRSDGDNV NLQPLVAMFG TLVAQGEKAA ASLDILISSI SADLLADVVM ANMRNLPSNQ PKAVDDEEPP LKPENVSDFR RLLLLLIDAI
501: SQSTMLAEQD ERADQNLVSI EPELQKTKVA EEHLDPATTN GTFDALNCAS EEAPEYVTEP LSSTKGTPQL IENDVSSLQC DVADIEKTED SIPGLDSVAL
601: KDEESDLVAV SAFGTTEVED GTQDQGSSVV RSSLEVVPSN STDRSEELSP KAAVTDVTSM NSSTATSIGL SPQLLLPKIS APVINLSEEE KDNLQKSAFT
701: RVIDAYKQIA IAGGSQVRFS LLAYLGVEFP SELNPWKFLQ THILSDYMNH EGHELTLRVL YRLYGHAEED QDFFSSTAAA SVYETFLLAV AETLRDSFPA
801: SDKSLSRLLC EAPHLPNSTL KLLESFCCPG SCEKDEKELH SGDRVTQGLS TVWNLIMLRP LMREACLKIA LQGRGAHKLA QTPHLSKKKK ESK
101: PAVARQAITC GIGIFRCTLV KVAIQGLFSS QLDGSLESAW ALMLKFREEI YTMAFLPASD GRKLLALKFV ESVVLLYTPD PNVGSEPPPA LDIKGKFEQF
201: NVSWLRGGHP VLDIGDLSVK ASQSLGLLLD QLRSPAVKSI TNLMIIVVIK CLSEIATKRP AFYGRILPVL LSLSPARSDG NKLHVSGVYR ALKTAFISCL
301: HCKHPGAAPW RDRLEVALRE KRAGVQAGPV VSQDSQNNGD TELKDVSSIL EDSKPSIKSS SGTKRSGVEH NAELIDDNLS KKRMRSTPIV SKAPKQEPSG
401: IQERVSAGGS TTTRSDGDNV NLQPLVAMFG TLVAQGEKAA ASLDILISSI SADLLADVVM ANMRNLPSNQ PKAVDDEEPP LKPENVSDFR RLLLLLIDAI
501: SQSTMLAEQD ERADQNLVSI EPELQKTKVA EEHLDPATTN GTFDALNCAS EEAPEYVTEP LSSTKGTPQL IENDVSSLQC DVADIEKTED SIPGLDSVAL
601: KDEESDLVAV SAFGTTEVED GTQDQGSSVV RSSLEVVPSN STDRSEELSP KAAVTDVTSM NSSTATSIGL SPQLLLPKIS APVINLSEEE KDNLQKSAFT
701: RVIDAYKQIA IAGGSQVRFS LLAYLGVEFP SELNPWKFLQ THILSDYMNH EGHELTLRVL YRLYGHAEED QDFFSSTAAA SVYETFLLAV AETLRDSFPA
801: SDKSLSRLLC EAPHLPNSTL KLLESFCCPG SCEKDEKELH SGDRVTQGLS TVWNLIMLRP LMREACLKIA LQGRGAHKLA QTPHLSKKKK ESK
0001: MVGIMASYSR ARLKDLANSA KSATELPPKL QRLRYMRRDL QKDDSVFPTE LLPHLFDLLS DQFGAVRKFV AEILGEIGLK YVELIPEIVP LLIKSLEDET
0101: PAVARQVIAC GADLFRSTLE RVAVQGLHSS ELNDLLESSW TWLIKFKDEI CSVAFKQGNS GVKLCAMKFV EALILLYTPH EGIEADFNIS ILRGGHPVLK
0201: IGDLSIEASQ KLGLLLDQLR HPAAKSLNSS TIIVLINSLS SVAKKRPAYC GRILPVLLSL DPLSFLKGVY AAATNLALKT VFLSCLKCTH PAAAPWKDRL
0301: TSALKEIEGG GQAAKAKDLF YKTNGSIQDK DSVEDTKVSV EENPLCASSD VAESNLSRKR SGSEYNIDLN GDASDGKRAR ITPSVSEEST DGLNGNDGVS
0401: LPRVASTSTG PSDSRGVSDS GPAQQLVGLF GTLVSQGEKA IGSLEILISS ISADLLTDVV MANMHNIPPN CSSYADGTDE LVMNMCIVGS DAQIKYPPSF
0501: VAGVLSLSTA FPPIAALINP HNEDEEVYSV HVDQQMFPAE DARTPPGLLA TCDTSFPENE ESNTVSPQNV HYIGNRESGI PGLESSAQHD GSGALVTNVL
0601: SSTNVEAASK NQNASFSGKL LVDVIPSMSV DKLEEFSPKA VGTVASASQF VLPKISAPVV DLSDEEKDSL QKLVFLRIVE AYKQISMSGG SQLRFSLLAH
0701: LGVEFPSELD PWKILQEHVL SDYLNHEGHE LTVRVLYRLY GEAEAEQDFF SSTTAASAYE SFLLTVAEAL RDSFPPSDKS LSKLLGDSPH LPKSVLMLLE
0801: SFCCPGSGEV EKDLQHGDRV TQGLSAVWSL ILMRPGIRND CLNIALQSAV HHLEEIRMKA IRLVANKLYS LSFITEQIEE FAKDRLFSVV SDDCDKMDLD
0901: LKSPPNKPQH SISGMSMETP SEATSSSTSV TEAQRCLSLY FALCTKKHSL FVHVFSIYKN ASDPVKQAIH LQIPILVRTM GSSSELLKII ADPPSGSDNL
1001: LIQVLQTLTE GPTPSSELIL TIRKLFDTRI KDVEILFPIL PFLPRDDVLR IFPHMVNLPM EKFQVALSRV LQGSSQSGPV LSPSEALIAI HSIDPARDGI
1101: PLKQVTDACN TCFAQRQTFT QQVLAGVLNQ LVQQIPLPML FMRTVLQAIG AFPALSDFIL EILSRLVSKQ IWKYPKLWVG FLKCTQTTQP QSYKVLLQLP
1201: PLQLGNALTK IPALRAPLTA HASQPEIQSS LPRSTLAVLG LVPDSQGTQT SQVQANETQT SQEQQQQQAS EPQQTSQSQQ VSVPLSHSQV DHQEPSQVVA
1301: SQSQSSPIGT VQSAMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSESQS SPIGQSQSSP IGTGQSDMSQ
1401: TPQVSDSSAP EPTSHTRTSD PQASSQTLRD DDEKIDDTAT SENEVTEIEK SKESSEEEEE EEEEEE
0101: PAVARQVIAC GADLFRSTLE RVAVQGLHSS ELNDLLESSW TWLIKFKDEI CSVAFKQGNS GVKLCAMKFV EALILLYTPH EGIEADFNIS ILRGGHPVLK
0201: IGDLSIEASQ KLGLLLDQLR HPAAKSLNSS TIIVLINSLS SVAKKRPAYC GRILPVLLSL DPLSFLKGVY AAATNLALKT VFLSCLKCTH PAAAPWKDRL
0301: TSALKEIEGG GQAAKAKDLF YKTNGSIQDK DSVEDTKVSV EENPLCASSD VAESNLSRKR SGSEYNIDLN GDASDGKRAR ITPSVSEEST DGLNGNDGVS
0401: LPRVASTSTG PSDSRGVSDS GPAQQLVGLF GTLVSQGEKA IGSLEILISS ISADLLTDVV MANMHNIPPN CSSYADGTDE LVMNMCIVGS DAQIKYPPSF
0501: VAGVLSLSTA FPPIAALINP HNEDEEVYSV HVDQQMFPAE DARTPPGLLA TCDTSFPENE ESNTVSPQNV HYIGNRESGI PGLESSAQHD GSGALVTNVL
0601: SSTNVEAASK NQNASFSGKL LVDVIPSMSV DKLEEFSPKA VGTVASASQF VLPKISAPVV DLSDEEKDSL QKLVFLRIVE AYKQISMSGG SQLRFSLLAH
0701: LGVEFPSELD PWKILQEHVL SDYLNHEGHE LTVRVLYRLY GEAEAEQDFF SSTTAASAYE SFLLTVAEAL RDSFPPSDKS LSKLLGDSPH LPKSVLMLLE
0801: SFCCPGSGEV EKDLQHGDRV TQGLSAVWSL ILMRPGIRND CLNIALQSAV HHLEEIRMKA IRLVANKLYS LSFITEQIEE FAKDRLFSVV SDDCDKMDLD
0901: LKSPPNKPQH SISGMSMETP SEATSSSTSV TEAQRCLSLY FALCTKKHSL FVHVFSIYKN ASDPVKQAIH LQIPILVRTM GSSSELLKII ADPPSGSDNL
1001: LIQVLQTLTE GPTPSSELIL TIRKLFDTRI KDVEILFPIL PFLPRDDVLR IFPHMVNLPM EKFQVALSRV LQGSSQSGPV LSPSEALIAI HSIDPARDGI
1101: PLKQVTDACN TCFAQRQTFT QQVLAGVLNQ LVQQIPLPML FMRTVLQAIG AFPALSDFIL EILSRLVSKQ IWKYPKLWVG FLKCTQTTQP QSYKVLLQLP
1201: PLQLGNALTK IPALRAPLTA HASQPEIQSS LPRSTLAVLG LVPDSQGTQT SQVQANETQT SQEQQQQQAS EPQQTSQSQQ VSVPLSHSQV DHQEPSQVVA
1301: SQSQSSPIGT VQSAMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSESQS SPIGQSQSSP IGTGQSDMSQ
1401: TPQVSDSSAP EPTSHTRTSD PQASSQTLRD DDEKIDDTAT SENEVTEIEK SKESSEEEEE EEEEEE
Arabidopsis Description
ESP4HEAT repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M033]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.