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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022586_P001 Maize cytosol 87.21 84.29
HORVU2Hr1G013790.2 Barley cytosol 74.42 77.34
Os07t0693900-01 Rice cytosol, plastid 75.7 75.58
TraesCS2D01G082200.3 Wheat cytosol, plastid 76.27 75.3
TraesCS2B01G098800.3 Wheat cytosol, plastid 76.19 74.98
TraesCS2A01G084200.1 Wheat cytosol, plastid 75.54 74.58
GSMUA_Achr6P15580_001 Banana cytosol 54.06 55.91
Solyc09g005340.2.1 Tomato nucleus 20.68 52.77
VIT_08s0105g00330.t01 Wine grape cytosol 52.13 48.65
KRH65727 Soybean cytosol 49.64 45.47
KRH75969 Soybean cytosol 48.67 44.49
Solyc09g005330.2.1 Tomato nucleus 28.32 39.42
AT5G01400.1 Thale cress nucleus 45.45 38.51
CDY04840 Canola plastid 44.73 38.21
Bra028900.1-P Field mustard plastid 44.97 36.9
KRG88461 Soybean cytosol 5.79 35.64
KXG31070 Sorghum plastid 32.34 31.83
OQU87378 Sorghum cytosol, plasma membrane 31.3 30.63
Protein Annotations
Gene3D:1.25.10.10MapMan:16.2.1.2.9UniProt:A0A1B6QGJ0InterPro:ARM-likeInterPro:ARM-type_foldGO:GO:0003674
GO:GO:0005488GO:GO:0006139GO:GO:0006396GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0035194GO:GO:0040029InterPro:HEAT_type_2InterPro:IPR011989InterPro:IPR021133EnsemblPlants:KXG37042
ProteinID:KXG37042ProteinID:KXG37042.1PFAM:PF11935PFAM:PF12295PFscan:PS50077PANTHER:PTHR15245
PANTHER:PTHR15245:SF35EnsemblPlantsGene:SORBI_3002G430300SUPFAM:SSF48371InterPro:Symplekin/Pta1_NInterPro:Symplekin_CUniParc:UPI00081ABD16
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:+:77590115..77601277
Molecular Weight (calculated)
135173.0 Da
IEP (calculated)
5.318
GRAVY (calculated)
-0.099
Length
1243 amino acids
Sequence
(BLAST)
0001: MLAARNPPPP PHDIAARLHH LRDLRRVPLP NRVARIADLH TDEASPVRKL VAEIIGELGS KHMAYLPDMI PCLLHLLNDE TPAVVRQAVK TGTNLFSKVL
0101: QKLVIQGLFS TGGIDDALKL SWEWLLKFKS VVSHMAFQAT GNEGVRLLAV KFVEKTVLMY TPDPNVPSDP PTETTEVMGF NVAWLRAGGH PLLNVGDLAM
0201: EASQSLGLLL EQLKYPKVKS LSTSMIIVFI TSLSAIAQTR PSFYGRILPV LLSLDPASSI IKLRVPGAFH ALKSAFSACL KCTHSSAEPW RERLLEAQNI
0301: VNQGDSREDA ANAAKNFGDT SNREESWLLM ERSTDGSNKR SLAEDMNHMT EDDLHSPKRA RQSFDANEHS EGANKRNVES TSVDISSSQP SSIRTGNSEA
0401: VYQLIGMFAA LAAQGDRAAG SLQILSSSIA SDLLAEVVMV NMQHLPISRP EVDQQQLPST SSGDGLPLSS FFSLLGTLLK RANQIDQDEV SPTKESAVVS
0501: SVADDIMTVP ASSPVPSSVN LPIEENTNSP TVPLCIETTE AKVSSAGGNS SIDIPESSEA SHASTELQGT QEHASTFVSS FPADNSSAGF SLAQSSETRS
0601: PSSSTVEANH SQLSSLSSQY VLPKLVVNNI DLSDEAKDLL QKEAFVRILE SDKQEASGGS IARLPLLAHL GVEFPLELDP WEILQKHVLS DYANNEGHEL
0701: TICILNRLYR EAEQDQDFLS STTATSVYES FLLNIAENLR DMFPASDKSL GKLLCEIPYL PEGVLKLLEG LCSPGSNEKQ DKDIQSGDRV TQGLSAVWNL
0801: IMLRPSNRDR CLEIALQSST HHLEEVRMKA IRLVANKLFP MASISKKIED FANEKLNSVL EVIPSGDSAT TEMATPQAHK DVGLENLTAP VADAQTLMSL
0901: YFALCTKKHS LLRHVFAIYG NLPQAAKQAV HRQVPILIRT IGSSSDLLGI ISDPPADCWD LLMQVLQTLT DAAVPSKDLI SSIKILYSKT KDVEVLFAIL
1001: AHLPKDEVLP VFPSIVNLPI DKFQGAISRI LQGSPRTGPS LDPSEILIAI HVIDPDKEGI PLKKVMDACS SCFEQRTIFT QQVLAKALNQ LVEQIPLPLL
1101: FMRTVMQAIG VFPALVDFVM EIMSRLVSKQ IWKYPKLWVG FLKCAILTKP QSYGVLLQLP APQLENALSK NPTLKAPLAE HAEQPNIRST LPRSTLVVLG
1201: LAEDQPQQPA AAQAQSSQNQ AVETSSSAAD TATEVTQESS AAS
Best Arabidopsis Sequence Match ( AT5G01400.3 )
(BLAST)
0001: MVGIMASYSR ARLKDLANSA KSATELPPKL QRLRYMRRDL QKDDSVFPTE LLPHLFDLLS DQFGAVRKFV AEILGEIGLK YVELIPEIVP LLIKSLEDET
0101: PAVARQVIAC GADLFRSTLE RVAVQGLHSS ELNDLLESSW TWLIKFKDEI CSVAFKQGNS GVKLCAMKFV EALILLYTPH EGIEADFNIS ILRGGHPVLK
0201: IGDLSIEASQ KLGLLLDQLR HPAAKSLNSS TIIVLINSLS SVAKKRPAYC GRILPVLLSL DPLSFLKGVY AAATNLALKT VFLSCLKCTH PAAAPWKDRL
0301: TSALKEIEGG GQAAKAKDLF YKTNGSIQDK DSVEDTKVSV EENPLCASSD VAESNLSRKR SGSEYNIDLN GDASDGKRAR ITPSVSEEST DGLNGNDGVS
0401: LPRVASTSTG PSDSRGVSDS GPAQQLVGLF GTLVSQGEKA IGSLEILISS ISADLLTDVV MANMHNIPPN CSSYADGTDE LVMNMCIVGS DAQIKYPPSF
0501: VAGVLSLSTA FPPIAALINP HNEDEEVYSV HVDQQMFPAE DARTPPGLLA TCDTSFPENE ESNTVSPQNV HYIGNRESGI PGLESSAQHD GSGALVTNVL
0601: SSTNVEAASK NQNASFSGKL LVDVIPSMSV DKLEEFSPKA VGTVASASQF VLPKISAPVV DLSDEEKDSL QKLVFLRIVE AYKQISMSGG SQLRFSLLAH
0701: LGVEFPSELD PWKILQEHVL SDYLNHEGHE LTVRVLYRLY GEAEAEQDFF SSTTAASAYE SFLLTVAEAL RDSFPPSDKS LSKLLGDSPH LPKSVLMLLE
0801: SFCCPGSGEV EKDLQHGDRV TQGLSAVWSL ILMRPGIRND CLNIALQSAV HHLEEIRMKA IRLVANKLYS LSFITEQIEE FAKDRLFSVV SDDCDKMDLD
0901: LKSPPNKPQH SISGMSMETP SEATSSSTSV TEAQRCLSLY FALCTKKHSL FVHVFSIYKN ASDPVKQAIH LQIPILVRTM GSSSELLKII ADPPSGSDNL
1001: LIQVLQTLTE GPTPSSELIL TIRKLFDTRI KDVEILFPIL PFLPRDDVLR IFPHMVNLPM EKFQVALSRV LQGSSQSGPV LSPSEALIAI HSIDPARDGI
1101: PLKQVTDACN TCFAQRQTFT QQVLAGVLNQ LVQQIPLPML FMRTVLQAIG AFPALSDFIL EILSRLVSKQ IWKYPKLWVG FLKCTQTTQP QSYKVLLQLP
1201: PLQLGNALTK IPALRAPLTA HASQPEIQSS LPRSTLAVLG LVPDSQGTQT SQVQANETQT SQEQQQQQAS EPQQTSQSQQ VSVPLSHSQV DHQEPSQVVA
1301: SQSQSSPIGT VQSAMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSQSQN SPIDTGRSEM SQSQNSPIDT GRSEMSESQS SPIGQSQSSP IGTGQSDMSQ
1401: TPQVSDSSAP EPTSHTRTSD PQASSQTLRD DDEKIDDTAT SENEVTEIEK SKESSEEEEE EEEEEE
Arabidopsis Description
ESP4HEAT repeat-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M033]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.