Factsheet for TraesCS1A01G250200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2D01G300300.1
TraesCS3A01G220600.2
TraesCS3B01G250900.2
TraesCS3D01G231900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43690.1	TraesCS2D01G300300.1	AT5G45900.1	21798944
AT5G43690.1	TraesCS3A01G220600.2	AT5G45900.1	21798944
AT5G43690.1	TraesCS3B01G250900.2	AT5G45900.1	21798944
AT5G43690.1	TraesCS3D01G231900.1	AT5G45900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G249800.1	Wheat	mitochondrion	88.86	89.38
Os08t0240000-02	Rice	cytosol	63.34	62.07
Os08t0297800-01	Rice	cytosol	56.89	57.91
Os08t0277300-00	Rice	extracellular	59.82	55.28
TraesCS1A01G023200.1	Wheat	cytosol	54.55	55.03
CDX80986	Canola	cytosol	3.23	55.0
TraesCS4A01G496100.1	Wheat	cytosol	53.37	54.49
TraesCS4A01G415200.1	Wheat	cytosol	53.96	53.96
TraesCS2A01G537500.1	Wheat	cytosol	51.91	51.75
TraesCS2A01G536200.1	Wheat	plastid	51.03	51.48
TraesCS2A01G426500.1	Wheat	cytosol	53.08	51.27
TraesCS7A01G001500.1	Wheat	cytosol	50.15	51.2
TraesCS7A01G081400.1	Wheat	cytosol	51.03	50.14
TraesCS2A01G056500.1	Wheat	cytosol	48.97	48.97
TraesCS2A01G056600.1	Wheat	cytosol, nucleus, peroxisome	26.1	47.34
CDY04207	Canola	cytosol	24.63	47.19
TraesCS3A01G388700.1	Wheat	mitochondrion	38.42	46.79
TraesCS1A01G358700.1	Wheat	cytosol	44.87	46.65
TraesCS7A01G249700.2	Wheat	cytosol	42.23	44.72
TraesCS1A01G358900.1	Wheat	cytosol	45.75	44.19
TraesCS2A01G537400.1	Wheat	cytosol	41.64	44.1
GSMUA_Achr8P04290_001	Banana	cytosol	39.0	44.04
VIT_17s0000g10200.t01	Wine grape	cytosol	39.88	43.45
CDY11353	Canola	nucleus	37.54	43.39
Bra005878.1-P	Field mustard	nucleus	41.06	43.08
CDX89350	Canola	nucleus	39.3	42.95
TraesCS3A01G429400.1	Wheat	cytosol	26.69	42.92
VIT_13s0084g00240.t01	Wine grape	cytosol	41.64	42.64
PGSC0003DMT400072875	Potato	cytosol	29.91	42.5
CDX80987	Canola	nucleus	37.24	42.47
VIT_13s0084g00250.t01	Wine grape	cytosol	41.35	42.47
CDY11746	Canola	cytosol	40.47	42.46
Bra005876.1-P	Field mustard	cytosol	40.47	42.33
CDY11350	Canola	cytosol	40.47	42.33
CDX94351	Canola	cytosol	38.71	42.31
CDY62444	Canola	cytosol	26.1	41.78
AT1G28170.1	Thale cress	cytosol	39.88	41.72
AT5G43690.1	Thale cress	cytosol	40.47	41.69
Bra034065.1-P	Field mustard	cytosol	39.0	41.56
Bra010899.1-P	Field mustard	cytosol	39.59	41.54
CDX90128	Canola	cytosol	39.59	41.54
CDY42747	Canola	cytosol	37.83	41.48
Solyc03g114800.1.1	Tomato	extracellular	38.42	41.46
CDY11352	Canola	nucleus	40.47	41.44
Bra026450.1-P	Field mustard	nucleus	39.88	41.34
Bra005879.1-P	Field mustard	cytosol	38.12	41.27
VIT_17s0000g04930.t01	Wine grape	cytosol	34.6	41.26
CDY46907	Canola	nucleus	30.79	41.18
CDX80984	Canola	cytosol	37.54	41.16
TraesCS1A01G302100.1	Wheat	cytosol	42.23	41.14
AT4G26280.1	Thale cress	cytosol	37.83	41.08
CDY34560	Canola	cytosol	36.95	41.04
TraesCS5A01G355900.1	Wheat	cytosol	44.28	41.03
CDX92759	Canola	cytosol	37.24	40.97
CDY42798	Canola	cytosol	40.18	40.9
TraesCS2A01G375700.1	Wheat	cytosol	40.76	40.88
CDY22189	Canola	cytosol	39.88	40.72
CDY60437	Canola	cytosol	36.36	40.66
PGSC0003DMT400014241	Potato	cytosol	39.3	40.61
TraesCS3A01G388600.1	Wheat	cytosol	40.76	40.52
Bra004046.1-P	Field mustard	cytosol	38.71	40.49
CDY34562	Canola	nucleus	31.09	40.46
Bra041015.1-P	Field mustard	cytosol	39.0	40.43
PGSC0003DMT400086700	Potato	cytosol	39.0	40.43
Bra036913.1-P	Field mustard	cytosol	39.59	40.3
CDY29781	Canola	cytosol	39.59	40.3
CDY34676	Canola	nucleus	26.39	40.18
CDY34679	Canola	cytosol	38.71	40.12
Bra004349.1-P	Field mustard	cytosol	38.42	40.06
Solyc09g055500.1.1	Tomato	cytosol	39.0	40.06
VIT_13s0084g00380.t01	Wine grape	cytosol	40.18	40.06
Bra009164.1-P	Field mustard	cytosol	35.78	40.0
CDY34677	Canola	cytosol	2.35	40.0
PGSC0003DMT400072874	Potato	cytosol	39.3	40.0
TraesCS5A01G347700.1	Wheat	cytosol	40.47	40.0
CDY31830	Canola	nucleus	29.03	39.92
Bra027963.1-P	Field mustard	nucleus	39.3	39.88
CDY42346	Canola	nucleus	39.3	39.88
Bra016726.1-P	Field mustard	cytosol	38.12	39.88
Bra034066.1-P	Field mustard	nucleus	38.42	39.82
CDY22190	Canola	nucleus	38.42	39.82
Solyc05g047510.1.1	Tomato	cytosol	38.42	39.82
CDX95244	Canola	cytosol	39.0	39.7
KRH45414	Soybean	cytosol	39.0	39.7
PGSC0003DMT400066060	Potato	cytosol	35.78	39.61
TraesCS2A01G375800.1	Wheat	cytosol	39.59	39.59
CDY45712	Canola	cytosol	38.71	39.52
CDY49688	Canola	cytosol	38.71	39.52
CDY32052	Canola	cytosol	38.12	39.51
PGSC0003DMT400008501	Potato	cytosol	39.0	39.47
Solyc05g011870.1.1	Tomato	cytosol	38.42	39.46
AT1G13420.1	Thale cress	nucleus	38.12	39.27
AT3G45080.1	Thale cress	nucleus	37.83	39.21
CDY60367	Canola	cytosol	37.83	39.09
KRH20753	Soybean	cytosol	37.54	39.02
PGSC0003DMT400096724	Potato	cytosol	37.54	38.91
Solyc11g027800.1.1	Tomato	cytosol	37.54	38.91
CDY07562	Canola	cytosol	32.26	38.87
PGSC0003DMT400096856	Potato	cytosol	37.54	38.79
VIT_13s0106g00550.t01	Wine grape	cytosol	39.0	38.78
KRH20754	Soybean	cytosol	36.95	38.77
Solyc05g011890.1.1	Tomato	cytosol	38.12	38.69
Solyc05g011840.2.1	Tomato	cytosol	31.38	38.49
Solyc11g050930.1.1	Tomato	cytosol	36.95	38.3
CDY25540	Canola	nucleus	30.5	38.24
CDX80985	Canola	nucleus	26.1	38.2
Bra009300.1-P	Field mustard	cytosol	39.3	38.18
Bra026540.1-P	Field mustard	cytosol	35.48	38.05
TraesCS2A01G056700.1	Wheat	cytosol	37.54	37.87
TraesCS2A01G015100.1	Wheat	mitochondrion	39.88	37.78
AT2G27570.1	Thale cress	nucleus	30.21	37.73
KRH30105	Soybean	cytosol	37.83	37.72
KRH13298	Soybean	cytosol	25.51	37.66
AT2G14920.1	Thale cress	cytosol	36.66	37.54
TraesCS6A01G368500.1	Wheat	cytosol	36.66	37.54
TraesCS2A01G015200.1	Wheat	mitochondrion	39.59	37.5
AT3G45070.2	Thale cress	endoplasmic reticulum, golgi	39.0	37.46
AT5G07000.1	Thale cress	cytosol	38.12	37.46
PGSC0003DMT400072721	Potato	cytosol	36.66	37.31
PGSC0003DMT400063308	Potato	cytosol	38.12	37.14
AT2G03750.1	Thale cress	cytosol, golgi	38.12	37.04
TraesCS7A01G426000.1	Wheat	cytosol	35.19	36.92
CDY70313	Canola	cytosol	39.3	36.91
KRH20646	Soybean	cytosol	37.54	36.57
AT5G07010.1	Thale cress	cytosol	38.42	36.49
CDY58879	Canola	cytosol	38.42	36.49
Bra005921.1-P	Field mustard	cytosol, plastid	38.42	36.39
KRH20644	Soybean	cytosol	36.66	36.34
Bra027666.1-P	Field mustard	cytosol	31.09	36.3
CDX95240	Canola	nucleus	29.91	36.3
CDY61953	Canola	cytosol	29.33	36.23
CDX81030	Canola	cytosol	38.12	36.21
AT1G13430.1	Thale cress	nucleus	37.24	36.18
CDX99017	Canola	cytosol	39.0	35.95
TraesCS2A01G299300.1	Wheat	cytosol	36.95	35.9
Bra028711.1-P	Field mustard	cytosol	38.12	35.71
CDY05012	Canola	cytosol	38.42	35.6
Solyc05g047490.1.1	Tomato	cytosol	39.0	35.37
CDY14059	Canola	cytosol	38.12	35.33
TraesCS2A01G050300.1	Wheat	plastid	37.83	34.4
TraesCS6A01G249100.1	Wheat	cytosol	27.57	32.98
PGSC0003DMT400006072	Potato	cytosol	31.96	30.36
VIT_04s0079g00220.t01	Wine grape	cytosol	41.94	30.17
Bra034520.1-P	Field mustard	nucleus	23.75	28.62
Bra034521.1-P	Field mustard	cytosol	39.3	22.98

Protein Annotations

EnsemblPlants:TraesCS1A01G250200.1	EnsemblPlantsGene:TraesCS1A01G250200	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008146
GO:GO:0016740	InterPro:P-loop_NTPase	InterPro:Sulfotransferase_dom	PANTHER:PTHR11783	PANTHER:PTHR11783:SF88	PFAM:PF00685
SEG:seg	SUPFAM:SSF52540	MapMan:50.2.8	:	:	:

Description

No Description!

Coordinates

chr1A:-:441931297..441932525

Molecular Weight (calculated)

37830.5 Da

IEP (calculated)

7.027

GRAVY (calculated)

-0.126

Length

341 amino acids

Sequence
(BLAST)

001: MVGSETSSLL HGPVAFKDAD DGTIPVHPPT EYAAAVASLP TNLNHASNSK LKRRCYQGVW VREEWAPGIM AMQRSFAARP GDVVLASVPK SGTTWLKALI
101: FATMVRAACP PASPAHPLRR LNPHDCVPLV DRLFAVGREA VLDALPSPRL MCTHMPLSVL PPSISGGPYC KIVYICRDPK DMVVSLWHFI NRAQPDISLQ
201: EMFETVCEGT SNGGPFWDHI LGYWRASNAE PSRVLFLTYE QMLQDPLDKV RKLAQFLGRP FSDTEEEAGV VAEIVELCSL ENLKNLEVNK KGSQGVFFKF
301: SHDSYFRNGV VGDWVNHLTP EMAKRLDAIC EEKFRGSGFT F

Best Arabidopsis Sequence Match ( AT1G13420.1 )
(BLAST)

001: MGEKDIPRNL KEEEEEEEEN QSEETKSLIS SLPSDIDCSG TKLYKYQGCW YDKDILQAIL NFNKNFQPQE TDIIVASFPK SGTTWLKALT FALAQRSKHT
101: SDNHPLLTHN PHELVPYLEL DLYLKSSKPD LTKLPSSSPR LFSTHMSFDA LKVPLKESPC KIVYVCRNVK DVLVSLWCFE NSMSGENNLS LEALFESLCS
201: GVNLCGPLWE NVLGYWRGSL EDPKHVLFLR YEELKTEPRV QIKRLAEFLD CPFTKEEEDS GGVDKILELC SLRNLSGLEI NKTGSLSEGV SFKSFFRKGE
301: VGDWKSYMTP EMENKIDMIV EEKLQGSGLK L

Arabidopsis Description

SOT8Cytosolic sulfotransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.