Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G220600.2 | Wheat | cytosol | 97.65 | 97.55 |
| TraesCS3D01G231900.1 | Wheat | cytosol | 97.55 | 97.55 |
| HORVU3Hr1G054070.2 | Barley | mitochondrion | 91.08 | 85.78 |
| EES03274 | Sorghum | cytosol, nucleus, plastid | 74.02 | 73.8 |
| Os01t0614900-01 | Rice | cytosol | 74.51 | 72.94 |
| Zm00001d011347_P001 | Maize | cytosol, nucleus, peroxisome | 72.94 | 72.87 |
| KRH23906 | Soybean | cytosol | 35.29 | 52.48 |
| PGSC0003DMT400050524 | Potato | cytosol | 35.59 | 50.84 |
| Bra021999.1-P | Field mustard | cytosol | 34.71 | 50.79 |
| CDY50484 | Canola | cytosol | 34.71 | 50.79 |
| GSMUA_Achr2P06280_001 | Banana | cytosol, nucleus, peroxisome | 38.04 | 50.72 |
| CDX87757 | Canola | cytosol | 34.41 | 50.43 |
| AT5G45900.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 34.41 | 50.36 |
| Solyc11g068930.1.1 | Tomato | cytosol | 35.29 | 50.35 |
| VIT_10s0003g01150.t01 | Wine grape | cytosol | 36.37 | 47.2 |
Protein Annotations
| MapMan:19.3.3.3 | Gene3D:3.40.140.100 | Gene3D:3.40.140.70 | Gene3D:3.40.50.720 | InterPro:Atg7 | InterPro:Atg7_N |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 |
| GO:GO:0010150 | GO:GO:0050832 | PFAM:PF00899 | PFAM:PF16420 | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF3 |
| SUPFAM:SSF69572 | InterPro:ThiF_NAD_FAD-bd | EnsemblPlantsGene:TraesCS3B01G250900 | EnsemblPlants:TraesCS3B01G250900.2 | InterPro:Ubiquitin-activating_enz | TIGR:cd01486 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:401280766..401286458
Molecular Weight (calculated)
112375.0 Da
IEP (calculated)
5.353
GRAVY (calculated)
-0.164
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAKAEVRPR PLELDPITSR VELAFWEDLR RLKLDVLGTD DSPIPITGYY IPCTHPKMSG LLRLGGESLV PPSANSSGSR NSCPVPGTLI NTNNMRGLQN
0101: LDVEYLLREE AKKILHDIMY GKIEEDPSLL LRFLVISFAD LKNWKIYYSV AFPSLVFKSE MTLLSLHSAS LVLSQEEAKS LSKSLKEWRS SNETAALPFF
0201: FVDISSDSSI AIRQLKDWKD CQDNGQKFLF GFYDHGCHQD PGWALRNYIA FLSLRLKIEK IQFLCYREKR SELDLEKSLV GEASFPPPHG WDDSDYVPEA
0301: IGWEGEKPGD GRKEKKLKEI NLESMSPERR DEEQQLMHLK LMGWRHFPVD LEKLSGIRCL LLGAGTLGCE VSRLLMTWGV RKLTVVDGGH VSMPDVLKQS
0401: LYVDDDCGVP RATAIVPHLK ERCPAVDVEA IQMEIPAPGN PVSPSVLDDC ERLQTLVASS DVVFLLTDTW ESRWFPTLLC ANENKMAITA ALGHDSYLVM
0501: RHGAGPGTRR GNMDDVIAQI QNLSTEDALG RQRLGCCFCN DTTSLFNSVS DETVALPGLT SIVSGKAVEL FARMLHHPEG IHAPGDMAGM DTEHQLGLLP
0601: HQMRGSLPRC DLSTVISNSS NNCTACSNIV LSEYRREGLN FVMQAINQPT YLKDLTGISN LIKSDTCLKL PASFPVNSGK LSSARCLLLG AGTLGCDVAR
0701: ILMDYGVRNL TIVDSGCVVV SNLAKQSLYT TKDRKTPKAT AILEHLKERC SSVEVEGIQM EIPMPGHPVS SKEAAGVLKA CERLQELVAA HDAVFLLTDT
0801: RESRWLPTLL CANENKIAIT AALGYDSYLA MRHGAGPGIN SEGSDMVAAM NKLSAEDVLG RQRLGCYFCN DVIAPVDSVS NRTLDQQCTV TRPGLASIAS
0901: GHAADLFTRL LNHPDGIHAP GDIAGTSSER PSGLLPHQMR GSLSQYSLLT LMGYSSSSCI ACSNAVLREY RSRGLDFVMQ VINEPTYLED LTGLTELMKS
1001: ADYSRVEWVD EVDDEDFADM
0101: LDVEYLLREE AKKILHDIMY GKIEEDPSLL LRFLVISFAD LKNWKIYYSV AFPSLVFKSE MTLLSLHSAS LVLSQEEAKS LSKSLKEWRS SNETAALPFF
0201: FVDISSDSSI AIRQLKDWKD CQDNGQKFLF GFYDHGCHQD PGWALRNYIA FLSLRLKIEK IQFLCYREKR SELDLEKSLV GEASFPPPHG WDDSDYVPEA
0301: IGWEGEKPGD GRKEKKLKEI NLESMSPERR DEEQQLMHLK LMGWRHFPVD LEKLSGIRCL LLGAGTLGCE VSRLLMTWGV RKLTVVDGGH VSMPDVLKQS
0401: LYVDDDCGVP RATAIVPHLK ERCPAVDVEA IQMEIPAPGN PVSPSVLDDC ERLQTLVASS DVVFLLTDTW ESRWFPTLLC ANENKMAITA ALGHDSYLVM
0501: RHGAGPGTRR GNMDDVIAQI QNLSTEDALG RQRLGCCFCN DTTSLFNSVS DETVALPGLT SIVSGKAVEL FARMLHHPEG IHAPGDMAGM DTEHQLGLLP
0601: HQMRGSLPRC DLSTVISNSS NNCTACSNIV LSEYRREGLN FVMQAINQPT YLKDLTGISN LIKSDTCLKL PASFPVNSGK LSSARCLLLG AGTLGCDVAR
0701: ILMDYGVRNL TIVDSGCVVV SNLAKQSLYT TKDRKTPKAT AILEHLKERC SSVEVEGIQM EIPMPGHPVS SKEAAGVLKA CERLQELVAA HDAVFLLTDT
0801: RESRWLPTLL CANENKIAIT AALGYDSYLA MRHGAGPGIN SEGSDMVAAM NKLSAEDVLG RQRLGCYFCN DVIAPVDSVS NRTLDQQCTV TRPGLASIAS
0901: GHAADLFTRL LNHPDGIHAP GDIAGTSSER PSGLLPHQMR GSLSQYSLLT LMGYSSSSCI ACSNAVLREY RSRGLDFVMQ VINEPTYLED LTGLTELMKS
1001: ADYSRVEWVD EVDDEDFADM
001: MAEKETPAII LQFAPLNSSV DEGFWHSFSS LKLDKLGIDD SPISITGFYG PCGHPQVSNH LTLLSESLPL DEQSLIASTS HGNRNKCPVP GILYNTNTVE
101: SFNKLDKQSL LKAEANKIWE DIQSGKALED PSVLPRFLVI SFADLKKWSF RYWFAFPAFV LDPPVSLIEL KPASEYFSSE EAESVSAACN DWRDSDLTTD
201: VPFFLVSVSS DSKASIRHLK DLEACQGDHQ KLLFGFYDPC HLPSNPGWPL RNYLALIRSR WNLETVWFFC YRESRGFADL NLSLVGQASI TLSSGESAET
301: VPNSVGWELN KGKRVPRSIS LANSMDPTRL AVSAVDLNLK LMRWRALPSL NLNVLSSVKC LLLGAGTLGC QVARTLMGWG IRNITFVDYG KVAMSNPVRQ
401: SLYNFEDCLG RGEFKAVAAV KSLKQIFPAM ETSGVVMAIP MPGHPISSQE EDSVLGDCKR LSELIESHDA VFLLTDTRES RWLPSLLCAN ANKIAINAAL
501: GFDSYMVMRH GAGPTSLSDD MQNLDINKTN TQRLGCYFCN DVVAPQDSMT DRTLDQQCTV TRPGLAPIAG ALAVELLVGV LQHPLGINAK GDNSSLSNTG
601: NNDDSPLGIL PHQIRGSVSQ FSQITLLGQA SNSCTACSET VISEYRERGN SFILEAINHP TYLEDLTGLT ELKKAANSFN LDWEDDDTDD DDVAVDL
101: SFNKLDKQSL LKAEANKIWE DIQSGKALED PSVLPRFLVI SFADLKKWSF RYWFAFPAFV LDPPVSLIEL KPASEYFSSE EAESVSAACN DWRDSDLTTD
201: VPFFLVSVSS DSKASIRHLK DLEACQGDHQ KLLFGFYDPC HLPSNPGWPL RNYLALIRSR WNLETVWFFC YRESRGFADL NLSLVGQASI TLSSGESAET
301: VPNSVGWELN KGKRVPRSIS LANSMDPTRL AVSAVDLNLK LMRWRALPSL NLNVLSSVKC LLLGAGTLGC QVARTLMGWG IRNITFVDYG KVAMSNPVRQ
401: SLYNFEDCLG RGEFKAVAAV KSLKQIFPAM ETSGVVMAIP MPGHPISSQE EDSVLGDCKR LSELIESHDA VFLLTDTRES RWLPSLLCAN ANKIAINAAL
501: GFDSYMVMRH GAGPTSLSDD MQNLDINKTN TQRLGCYFCN DVVAPQDSMT DRTLDQQCTV TRPGLAPIAG ALAVELLVGV LQHPLGINAK GDNSSLSNTG
601: NNDDSPLGIL PHQIRGSVSQ FSQITLLGQA SNSCTACSET VISEYRERGN SFILEAINHP TYLEDLTGLT ELKKAANSFN LDWEDDDTDD DDVAVDL
Arabidopsis Description
ATG7Ubiquitin-like modifier-activating enzyme atg7 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD5]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.