Factsheet for GSMUA_Achr2P06280_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23906	Soybean	cytosol	60.91	67.93
PGSC0003DMT400050524	Potato	cytosol	63.27	67.79
Solyc11g068930.1.1	Tomato	cytosol	62.88	67.27
Bra021999.1-P	Field mustard	cytosol	60.13	66.0
CDY50484	Canola	cytosol	60.13	66.0
CDX87757	Canola	cytosol	60.0	65.95
AT5G45900.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	58.04	63.7
VIT_10s0003g01150.t01	Wine grape	cytosol	64.44	62.72
TraesCS2D01G300300.1	Wheat	cytosol	33.2	49.22
TraesCS3B01G250900.2	Wheat	cytosol	50.72	38.04
EES03274	Sorghum	cytosol, nucleus, plastid	50.72	37.93
TraesCS3D01G231900.1	Wheat	cytosol	50.33	37.75
TraesCS3A01G220600.2	Wheat	cytosol	50.33	37.71
Zm00001d011347_P001	Maize	cytosol, nucleus, peroxisome	49.8	37.32
Os01t0614900-01	Rice	cytosol	50.33	36.95
HORVU3Hr1G054070.2	Barley	mitochondrion	50.85	35.92

Protein Annotations

MapMan:19.3.3.3	Gene3D:3.40.140.100	Gene3D:3.40.140.70	Gene3D:3.40.50.720	InterPro:Atg7	InterPro:Atg7_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006914	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008641	GO:GO:0009056	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0010150
GO:GO:0016020	GO:GO:0016021	GO:GO:0050832	EnsemblPlantsGene:GSMUA_Achr2G06280_001	EnsemblPlants:GSMUA_Achr2P06280_001	EnsemblPlants:GSMUA_Achr2T06280_001
UniProt:M0S5L9	PFAM:PF00899	PFAM:PF16420	PANTHER:PTHR10953	PANTHER:PTHR10953:SF3	SUPFAM:SSF69572
TIGRFAMs:TIGR01381	TMHMM:TMhelix	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI00029664FB	InterPro:Ubiquitin-activating_enz	SEG:seg

Description

Ubiquitin-like modifier-activating enzyme atg7 [Source:GMGC_GENE;Acc:GSMUA_Achr2G06280_001]

Coordinates

chr2:-:11117790..11125043

Molecular Weight (calculated)

83803.3 Da

IEP (calculated)

6.209

GRAVY (calculated)

-0.079

Length

765 amino acids

Sequence
(BLAST)

001: MDSDPSKKRS QYITTFSPSI FYGGEESRDR DRGSIGGRAM ASSSSVVSSS SSSSSDKGSG RILQFDPFQS LVDEGFWHRL SSLKLDSLGL DQSPIPLTGT
101: PLSSFLLLTV FFLLLIRVNC PRFYAPCSHP KVSNRLTLLA ESLPSDFKEL QFSLERAHGN RNRCPVPGTL YNMNTFESFK ALDRDSLLKK EAKKILDDIH
201: SGKVEEDSAV LSRFFIISFA DLKKWNFLHW LAFPALVVGP PAVVLNLQPA REVFNQGEAQ SLSAALNEWR NSSLTTGVLY FLVSIASNSC ATIRQLKDWK
301: ACQDDGQKLL FGFYDPSCRL DNPGWPLRNY LAFISLRCQD GKIQFLCYRE KRGFADMGLS LVGEAVISPS KDCRDPQCVP KAVGWEPKPK SINLAESMNP
401: ERLAVSAADL NLKLMRWRTL PSLDLGTLSS VRCLLLGAGT LGCQVARMLM AWGVRKITLL DSGLVAMSNP VRQSLYTLDD CLDGGSLKAV AAARTLKRIF
501: PAVEAEGVTL SIPMPGHPVP TNEVARVLED CERLRDLIAS HDVTFLLTDT RESRWLPTLL CASENKIAIT AALGFDSYLV MRHGAGPLSV SDQTNSLSTV
601: DGNGGQRLGC YFCGDVVAPI DSTSNRTLDQ QCTVTRPGLA PIASALAVEL LVGLLHHPNG IYAPGEIANS IMSSSEQPFG ILPHQIRGLL PQYSQVTLIG
701: HASNSCTACS TTVVSELRRR GTEFILQAID HPTYLEDLTG LTELIESANS FKLDWDDETD DADDI

Best Arabidopsis Sequence Match ( AT5G45900.1 )
(BLAST)

001: MAEKETPAII LQFAPLNSSV DEGFWHSFSS LKLDKLGIDD SPISITGFYG PCGHPQVSNH LTLLSESLPL DEQSLIASTS HGNRNKCPVP GILYNTNTVE
101: SFNKLDKQSL LKAEANKIWE DIQSGKALED PSVLPRFLVI SFADLKKWSF RYWFAFPAFV LDPPVSLIEL KPASEYFSSE EAESVSAACN DWRDSDLTTD
201: VPFFLVSVSS DSKASIRHLK DLEACQGDHQ KLLFGFYDPC HLPSNPGWPL RNYLALIRSR WNLETVWFFC YRESRGFADL NLSLVGQASI TLSSGESAET
301: VPNSVGWELN KGKRVPRSIS LANSMDPTRL AVSAVDLNLK LMRWRALPSL NLNVLSSVKC LLLGAGTLGC QVARTLMGWG IRNITFVDYG KVAMSNPVRQ
401: SLYNFEDCLG RGEFKAVAAV KSLKQIFPAM ETSGVVMAIP MPGHPISSQE EDSVLGDCKR LSELIESHDA VFLLTDTRES RWLPSLLCAN ANKIAINAAL
501: GFDSYMVMRH GAGPTSLSDD MQNLDINKTN TQRLGCYFCN DVVAPQDSMT DRTLDQQCTV TRPGLAPIAG ALAVELLVGV LQHPLGINAK GDNSSLSNTG
601: NNDDSPLGIL PHQIRGSVSQ FSQITLLGQA SNSCTACSET VISEYRERGN SFILEAINHP TYLEDLTGLT ELKKAANSFN LDWEDDDTDD DDVAVDL

Arabidopsis Description

ATG7Ubiquitin-like modifier-activating enzyme atg7 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD5]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.