Factsheet for TraesCS1D01G249800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2D01G300300.1
TraesCS3A01G220600.2
TraesCS3B01G250900.2
TraesCS3D01G231900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43690.1	TraesCS2D01G300300.1	AT5G45900.1	21798944
AT5G43690.1	TraesCS3A01G220600.2	AT5G45900.1	21798944
AT5G43690.1	TraesCS3B01G250900.2	AT5G45900.1	21798944
AT5G43690.1	TraesCS3D01G231900.1	AT5G45900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G250200.1	Wheat	cytosol	89.38	88.86
TraesCS7D01G040200.1	Wheat	cytosol	76.7	77.15
TraesCS7D01G040300.1	Wheat	cytosol	75.52	75.96
Os08t0240000-02	Rice	cytosol	60.47	58.91
Os08t0297800-01	Rice	cytosol	54.87	55.52
TraesCS2D01G596600.1	Wheat	cytosol, plastid	53.39	53.39
Os08t0277300-00	Rice	extracellular	56.93	52.3
TraesCS2D01G181000.1	Wheat	cytosol	52.21	52.21
TraesCS2D01G086500.1	Wheat	cytosol, peroxisome, plastid	53.1	52.02
TraesCS2D01G538700.1	Wheat	cytosol	51.92	51.16
CDX80986	Canola	cytosol	2.95	50.0
TraesCS3D01G464900.2	Wheat	cytosol	51.33	49.43
TraesCS7D01G205300.1	Wheat	cytosol	49.56	48.98
TraesCS1D01G031800.1	Wheat	cytosol	50.15	48.85
TraesCS2D01G055300.1	Wheat	cytosol	48.67	48.39
TraesCS1D01G420200.1	Wheat	cytosol	48.38	47.13
TraesCS1D01G363600.1	Wheat	cytosol	45.72	46.55
CDY04207	Canola	cytosol	23.89	45.51
TraesCS2D01G037300.1	Wheat	cytosol	36.28	43.46
TraesCS2D01G538600.1	Wheat	cytosol	41.0	43.3
TraesCS5D01G363500.1	Wheat	cytosol	43.36	43.24
VIT_17s0000g10200.t01	Wine grape	cytosol	39.82	43.13
CDY11353	Canola	nucleus	37.46	43.05
TraesCS6D01G035400.1	Wheat	cytosol	41.0	42.77
GSMUA_Achr8P04290_001	Banana	cytosol	38.05	42.72
VIT_13s0084g00250.t01	Wine grape	cytosol	41.59	42.47
TraesCS5D01G363000.1	Wheat	cytosol	43.07	42.32
Bra005878.1-P	Field mustard	nucleus	40.41	42.15
CDX80987	Canola	nucleus	37.17	42.14
PGSC0003DMT400072875	Potato	cytosol	29.79	42.08
VIT_13s0084g00240.t01	Wine grape	cytosol	41.3	42.04
Bra005876.1-P	Field mustard	cytosol	40.41	42.02
CDY11350	Canola	cytosol	40.41	42.02
CDX89350	Canola	nucleus	38.64	41.99
TraesCS3D01G424700.1	Wheat	cytosol	35.99	41.92
TraesCS7D01G542000.1	Wheat	cytosol	42.77	41.91
CDY11746	Canola	cytosol	40.12	41.85
TraesCS2D01G372000.1	Wheat	cytosol	41.89	41.64
TraesCS7D01G541500.1	Wheat	cytosol	42.48	41.62
CDX90128	Canola	cytosol	39.82	41.54
CDX94351	Canola	cytosol	38.05	41.35
Bra005879.1-P	Field mustard	cytosol	38.35	41.27
Bra010899.1-P	Field mustard	cytosol	39.53	41.23
TraesCS2D01G371900.1	Wheat	cytosol	41.3	41.18
AT1G28170.1	Thale cress	cytosol	39.53	41.1
AT4G26280.1	Thale cress	cytosol	38.05	41.08
TraesCS6D01G035000.1	Wheat	cytosol	42.18	40.86
Bra026450.1-P	Field mustard	nucleus	39.53	40.73
Bra034065.1-P	Field mustard	cytosol	38.35	40.62
CDY11352	Canola	nucleus	39.82	40.54
TraesCS3D01G381000.1	Wheat	cytosol	41.0	40.52
CDY42747	Canola	cytosol	37.17	40.51
Solyc03g114800.1.1	Tomato	extracellular	37.76	40.51
AT5G43690.1	Thale cress	cytosol	39.53	40.48
TraesCS2D01G086400.1	Wheat	mitochondrion	39.53	40.24
CDX80984	Canola	cytosol	36.87	40.19
TraesCS7D01G540900.1	Wheat	cytosol	42.18	40.17
TraesCS3D01G380900.1	Wheat	cytosol	40.71	40.12
CDY34562	Canola	nucleus	30.97	40.08
CDY34560	Canola	cytosol	36.28	40.07
TraesCS3D01G024900.1	Wheat	cytosol	39.82	40.06
CDX92759	Canola	cytosol	36.58	40.0
CDY34677	Canola	cytosol	2.36	40.0
TraesCS1D01G301500.1	Wheat	cytosol	41.3	40.0
TraesCS3D01G424800.1	Wheat	cytosol	37.76	40.0
Bra004046.1-P	Field mustard	cytosol	38.35	39.88
Bra041015.1-P	Field mustard	cytosol	38.64	39.82
VIT_13s0084g00380.t01	Wine grape	cytosol	40.12	39.77
KRH45414	Soybean	cytosol	39.23	39.7
CDY60437	Canola	cytosol	35.69	39.67
Bra016726.1-P	Field mustard	cytosol	38.05	39.57
AT3G45080.1	Thale cress	nucleus	38.35	39.51
PGSC0003DMT400086700	Potato	cytosol	38.35	39.51
VIT_17s0000g04930.t01	Wine grape	cytosol	33.33	39.51
PGSC0003DMT400008501	Potato	cytosol	39.23	39.47
Bra004349.1-P	Field mustard	cytosol	38.05	39.45
CDY62444	Canola	cytosol	24.78	39.44
CDY22189	Canola	cytosol	38.64	39.22
CDY46907	Canola	nucleus	29.5	39.22
CDY34679	Canola	cytosol	38.05	39.21
Solyc09g055500.1.1	Tomato	cytosol	38.35	39.16
CDY42798	Canola	cytosol	38.64	39.1
PGSC0003DMT400014241	Potato	cytosol	38.05	39.09
Bra009164.1-P	Field mustard	cytosol	35.1	39.02
Solyc05g047510.1.1	Tomato	cytosol	37.76	38.91
CDY34676	Canola	nucleus	25.66	38.84
Bra036913.1-P	Field mustard	cytosol	38.35	38.81
CDY29781	Canola	cytosol	38.35	38.81
CDY60367	Canola	cytosol	37.76	38.79
AT1G13420.1	Thale cress	nucleus	37.76	38.67
CDY32052	Canola	cytosol	37.46	38.6
KRH13298	Soybean	cytosol	26.25	38.53
PGSC0003DMT400072874	Potato	cytosol	38.05	38.51
TraesCS7D01G418500.4	Wheat	cytosol	36.87	38.46
KRH20753	Soybean	cytosol	37.17	38.41
Bra027963.1-P	Field mustard	nucleus	38.05	38.39
CDY42346	Canola	nucleus	38.05	38.39
Solyc05g011890.1.1	Tomato	cytosol	38.05	38.39
Bra034066.1-P	Field mustard	nucleus	37.17	38.3
CDY22190	Canola	nucleus	37.17	38.3
Solyc11g027800.1.1	Tomato	cytosol	37.17	38.3
CDX95244	Canola	cytosol	37.76	38.21
CDX80985	Canola	nucleus	26.25	38.2
VIT_13s0106g00550.t01	Wine grape	cytosol	38.64	38.19
KRH20754	Soybean	cytosol	36.58	38.15
AT2G27570.1	Thale cress	nucleus	30.68	38.1
AT3G45070.2	Thale cress	endoplasmic reticulum, golgi	39.82	38.03
CDY45712	Canola	cytosol	37.46	38.02
CDY49688	Canola	cytosol	37.46	38.02
PGSC0003DMT400096724	Potato	cytosol	36.87	37.99
PGSC0003DMT400066060	Potato	cytosol	34.51	37.99
Solyc05g011870.1.1	Tomato	cytosol	37.17	37.95
CDY31830	Canola	nucleus	27.73	37.9
Bra009300.1-P	Field mustard	cytosol	39.23	37.89
TraesCS2D01G015100.1	Wheat	cytosol	30.68	37.82
Solyc11g050930.1.1	Tomato	cytosol	36.58	37.69
TraesCS3D01G464800.1	Wheat	cytosol	36.87	37.54
CDY07562	Canola	cytosol	31.27	37.46
KRH30105	Soybean	cytosol	37.76	37.43
Bra026540.1-P	Field mustard	cytosol	35.1	37.42
PGSC0003DMT400072721	Potato	cytosol	36.87	37.31
PGSC0003DMT400096856	Potato	cytosol	36.28	37.27
AT5G07000.1	Thale cress	cytosol	38.05	37.18
TraesCS2D01G055500.1	Wheat	cytosol	36.87	36.98
AT2G14920.1	Thale cress	cytosol	36.28	36.94
KRH20646	Soybean	cytosol	38.05	36.86
TraesCS2D01G049800.1	Wheat	plastid	38.64	36.8
CDY25540	Canola	nucleus	29.5	36.76
Solyc05g011840.2.1	Tomato	cytosol	30.09	36.69
CDY70313	Canola	cytosol	39.23	36.64
PGSC0003DMT400063308	Potato	cytosol	37.76	36.57
TraesCS6D01G231100.1	Wheat	peroxisome	37.17	36.52
CDY58879	Canola	cytosol	38.64	36.49
Bra005921.1-P	Field mustard	cytosol, plastid	38.64	36.39
KRH20644	Soybean	cytosol	36.87	36.34
AT5G07010.1	Thale cress	cytosol	38.35	36.21
CDX81030	Canola	cytosol	38.35	36.21
TraesCS2D01G008500.1	Wheat	cytosol	35.4	36.04
AT1G13430.1	Thale cress	nucleus	37.17	35.9
Bra028711.1-P	Field mustard	cytosol	38.35	35.71
CDX99017	Canola	cytosol	38.94	35.68
CDY05012	Canola	cytosol	38.64	35.6
AT2G03750.1	Thale cress	cytosol, golgi	36.58	35.33
CDY61953	Canola	cytosol	28.61	35.14
CDY14059	Canola	cytosol	38.05	35.05
TraesCS2D01G297200.1	Wheat	cytosol	36.58	35.03
Bra027666.1-P	Field mustard	cytosol	30.09	34.93
CDX95240	Canola	nucleus	28.91	34.88
TraesCS2D01G039100.1	Wheat	plastid	38.64	34.66
Solyc05g047490.1.1	Tomato	cytosol	38.35	34.57
TraesCS5D01G353900.1	Wheat	cytosol	35.1	34.2
TraesCS2D01G045300.1	Wheat	peroxisome	33.92	34.12
TraesCS2D01G006800.1	Wheat	cytosol	30.09	33.89
VIT_04s0079g00220.t01	Wine grape	cytosol	41.59	29.75
PGSC0003DMT400006072	Potato	cytosol	30.97	29.25
Bra034520.1-P	Field mustard	nucleus	23.6	28.27
Bra034521.1-P	Field mustard	cytosol	37.76	21.96

Protein Annotations

EnsemblPlants:TraesCS1D01G249800.1	EnsemblPlantsGene:TraesCS1D01G249800	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008146
GO:GO:0016740	InterPro:P-loop_NTPase	InterPro:Sulfotransferase_dom	PANTHER:PTHR11783	PANTHER:PTHR11783:SF88	PFAM:PF00685
SUPFAM:SSF52540	MapMan:50.2.8	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:342224511..342225738

Molecular Weight (calculated)

37727.6 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.181

Length

339 amino acids

Sequence
(BLAST)

001: MRCLVAKRLV SSMAPWRSRT PTTAPSQCTL PAAVASLPTN QNHASNSKLK RRCYQGVWVR EEWAPGIMAM QRSFAARPGD VVLASVPKSG TTWLKALTFA
101: TMARAACPPA SPAHPLRRLN PHDCVPLVDR LFAVGRDAVL DALPSPRLMC THMPLSVLPP SISGGPHCKI VYICRDPKDM VVSLWHFVNR AQPDISLQEM
201: FETVCEGTSN GGPFWDHILG YWRASNAEPS RVLFLTYEQM LQDPLDKVRK LAQFLGRPFS DTEEEAGVVA EIVQLCSLEN LKNLEANKKG SQGVFFKFSH
301: DSYFRNGVVG DWVNHLTPEM AKRLDAICKE KFRGSGFTF

Best Arabidopsis Sequence Match ( AT5G43690.1 )
(BLAST)

001: MAGKSDLPVI ARDDNLSEET KTLISSLPTY QDSHVKLCKY QGCWYYHNTL QAVINYQRNF QPQDTDIILA SFPKSGTTWL KALSVAIVER SKQPFDDDPL
101: THPLLSDNPH GIVPFFEFDM YLKTSTPDLT KFSTSSPRLF STHMPLHTFK EGLKGSPCKV VYMCRNIKDV LISDWHFRSK YSNNEVSRST LESMFESFCG
201: GVSFYGPFWD HALSYWRGSL ENPKHVLFMR YEEMKTEPCV QVKRLAEFLG FPFTKEEEDS GSISKLLELC SLGNLSGLEV NKTGKTWMNY DYKSYFRKGE
301: VGDWKNHLTP EMENKIDMII EEKLKGSDLK F

Arabidopsis Description

SOT1Cytosolic sulfotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.