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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G342300.1 Wheat nucleus 45.82 23.95
TraesCS2A01G451700.1 Wheat nucleus 45.82 23.16
TraesCS2A01G451800.1 Wheat nucleus 45.82 23.08
TraesCS7A01G357100.1 Wheat nucleus 57.45 21.64
TraesCS6A01G191200.1 Wheat cytosol, mitochondrion 52.73 20.77
TraesCS4A01G246800.1 Wheat nucleus 48.36 18.27
TraesCS2A01G096500.1 Wheat cytosol, mitochondrion, nucleus, vacuole 28.36 15.66
TraesCS4A01G123900.1 Wheat nucleus 28.36 14.44
Protein Annotations
Gene3D:1.10.1410.10MapMan:16.2.1.1.1Gene3D:3.30.460.10ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004652GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016740GO:GO:0043631PFAM:PF04928
PANTHER:PTHR10682PANTHER:PTHR10682:SF29InterPro:PolA_pol_cen_domInterPro:PolyA_polymeraseSUPFAM:SSF81301SUPFAM:SSF81631
EnsemblPlantsGene:TraesCS2A01G073200EnsemblPlants:TraesCS2A01G073200.1SEG:seg:::
Description
No Description!
Coordinates
chr2A:-:32386755..32390610
Molecular Weight (calculated)
31106.2 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.245
Length
275 amino acids
Sequence
(BLAST)
001: MTSSAPTSFP KRKLGVTPAG SFDGPLEADL HSTQELEQLL AELGLYKSKE ETARQEEVLR KLDKIVKEWV KELAIQRGQV NTNVGLFTFG SYHLGVMLMN
101: LGLTSILYVL DQIVPSDLDI SQNSVLSGVD EVNLRSLSEC RVADQILDLV PNIENFRTTL RCVKHWAKRR GVCVNWYWPN PVMLCSIHED RELGFPVWNA
201: RFNREDRTHI MPIITPAYPC RNSTVHVSAT TLEVMKEQFQ IGNEVCQEIE MKQADWADLF EPLGDPPSDE TAVSC
Best Arabidopsis Sequence Match ( AT2G25850.1 )
(BLAST)
001: MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEG FVTPANLDSA VENRNLHSDG LFKSGLPEEL QSNSLLSGTG KLDDGASSRR LSLKSVA
Arabidopsis Description
PAPS2PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.