Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G342300.1 | Wheat | nucleus | 45.82 | 23.95 |
TraesCS2A01G451700.1 | Wheat | nucleus | 45.82 | 23.16 |
TraesCS2A01G451800.1 | Wheat | nucleus | 45.82 | 23.08 |
TraesCS7A01G357100.1 | Wheat | nucleus | 57.45 | 21.64 |
TraesCS6A01G191200.1 | Wheat | cytosol, mitochondrion | 52.73 | 20.77 |
TraesCS4A01G246800.1 | Wheat | nucleus | 48.36 | 18.27 |
TraesCS2A01G096500.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 28.36 | 15.66 |
TraesCS4A01G123900.1 | Wheat | nucleus | 28.36 | 14.44 |
Protein Annotations
Gene3D:1.10.1410.10 | MapMan:16.2.1.1.1 | Gene3D:3.30.460.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004652 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0043631 | PFAM:PF04928 |
PANTHER:PTHR10682 | PANTHER:PTHR10682:SF29 | InterPro:PolA_pol_cen_dom | InterPro:PolyA_polymerase | SUPFAM:SSF81301 | SUPFAM:SSF81631 |
EnsemblPlantsGene:TraesCS2A01G073200 | EnsemblPlants:TraesCS2A01G073200.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:32386755..32390610
Molecular Weight (calculated)
31106.2 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.245
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSAPTSFP KRKLGVTPAG SFDGPLEADL HSTQELEQLL AELGLYKSKE ETARQEEVLR KLDKIVKEWV KELAIQRGQV NTNVGLFTFG SYHLGVMLMN
101: LGLTSILYVL DQIVPSDLDI SQNSVLSGVD EVNLRSLSEC RVADQILDLV PNIENFRTTL RCVKHWAKRR GVCVNWYWPN PVMLCSIHED RELGFPVWNA
201: RFNREDRTHI MPIITPAYPC RNSTVHVSAT TLEVMKEQFQ IGNEVCQEIE MKQADWADLF EPLGDPPSDE TAVSC
101: LGLTSILYVL DQIVPSDLDI SQNSVLSGVD EVNLRSLSEC RVADQILDLV PNIENFRTTL RCVKHWAKRR GVCVNWYWPN PVMLCSIHED RELGFPVWNA
201: RFNREDRTHI MPIITPAYPC RNSTVHVSAT TLEVMKEQFQ IGNEVCQEIE MKQADWADLF EPLGDPPSDE TAVSC
001: MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEG FVTPANLDSA VENRNLHSDG LFKSGLPEEL QSNSLLSGTG KLDDGASSRR LSLKSVA
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEG FVTPANLDSA VENRNLHSDG LFKSGLPEEL QSNSLLSGTG KLDDGASSRR LSLKSVA
Arabidopsis Description
PAPS2PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.