Factsheet for TraesCS3D01G055500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G055600.1	Wheat	golgi, plastid	99.62	99.62
TraesCS2D01G325600.1	Wheat	golgi, plastid	91.6	91.25
TraesCS3B01G068000.1	Wheat	cytosol	96.56	89.72
TraesCS4D01G046400.2	Wheat	golgi	81.68	81.99
TraesCS4D01G155900.1	Wheat	plastid	80.92	79.7
TraesCS7D01G292400.1	Wheat	cytosol	72.9	73.18

Protein Annotations

EnsemblPlants:TraesCS3D01G055500.1	EnsemblPlantsGene:TraesCS3D01G055500	Gene3D:1.20.190.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	InterPro:IPR036815
ncoils:Coil	PANTHER:PTHR18860	PANTHER:PTHR18860:SF36	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305
ScanProsite:PS00796	ScanProsite:PS00797	SMART:SM00101	SUPFAM:SSF48445	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:23062119..23063555

Molecular Weight (calculated)

29750.1 Da

IEP (calculated)

4.423

GRAVY (calculated)

-0.518

Length

262 amino acids

Sequence
(BLAST)

001: MAQPAELSRE ENVYMAKLAE QAERYEEMVE FMEKVAKTVD SEELTVEERN LLSVAYKNVI GARRASWRII SSIEQKEESR GNEDRVTLIK DYRGKIEVEL
101: TKICDGILKL LDSHLVPSST APESKVFYLK MKGDYYRYLA EFKSGTERKD AAENTMVAYK AAQEIALKEL PPTHPIRLGL ALNFSVFYYE ILNSPDRACD
201: LAKQAFDEAI SELDSLSEES YKDSTLIMQL LRDNLTLWTS DISEDAAEEM KDAPKGESGD GQ

Best Arabidopsis Sequence Match ( AT4G09000.1 )
(BLAST)

001: MATPGASSAR DEFVYMAKLA EQAERYEEMV EFMEKVAKAV DKDELTVEER NLLSVAYKNV IGARRASWRI ISSIEQKEES RGNDDHVSLI RDYRSKIETE
101: LSDICDGILK LLDTILVPAA ASGDSKVFYL KMKGDYHRYL AEFKSGQERK DAAEHTLTAY KAAQDIANSE LAPTHPIRLG LALNFSVFYY EILNSPDRAC
201: NLAKQAFDEA IAELDTLGEE SYKDSTLIMQ LLRDNLTLWT SDMQDDVADD IKEAAPAAAK PADEQQS

Arabidopsis Description

GRF1General regulatory factor 1 [Source:UniProtKB/TrEMBL;Acc:F4JJ94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.