Factsheet for TraesCS3D01G291100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G326000.1	Wheat	nucleus	92.82	92.31
TraesCS3A01G291400.1	Wheat	nucleus	92.27	89.78
Os01t0752500-01	Rice	nucleus	69.61	59.43
KXG33377	Sorghum	plastid	62.43	50.22
Zm00001d043491_P001	Maize	nucleus	57.46	45.41
Zm00001d012736_P001	Maize	plastid	34.81	35.0
TraesCS2D01G039800.1	Wheat	nucleus, plastid	28.73	26.67
TraesCS2D01G040300.1	Wheat	nucleus	29.28	26.11
TraesCS2D01G040100.1	Wheat	nucleus	28.18	25.37
TraesCS2D01G040200.1	Wheat	nucleus	31.49	22.27
TraesCS4D01G315000.1	Wheat	nucleus	25.41	22.12
TraesCS5D01G314400.1	Wheat	nucleus	29.28	21.54
TraesCS5D01G549200.1	Wheat	nucleus	28.73	21.31
TraesCS4D01G310000.1	Wheat	nucleus	28.73	21.31
TraesCS1D01G331200.1	Wheat	nucleus	27.62	21.19
TraesCS2D01G391400.1	Wheat	plastid	32.6	21.15
TraesCS5D01G314900.1	Wheat	nucleus	24.31	21.05
TraesCS2D01G464600.1	Wheat	nucleus	29.28	21.03
TraesCS2D01G464400.1	Wheat	nucleus	30.39	20.91
TraesCS1D01G331100.1	Wheat	plastid	30.39	19.71
TraesCS7D01G031300.1	Wheat	nucleus	28.73	19.48
TraesCS1D01G407000.1	Wheat	nucleus	29.28	19.0
TraesCS1D01G407100.1	Wheat	nucleus	29.28	18.28

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF64	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS3D01G291100	EnsemblPlants:TraesCS3D01G291100.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:401171332..401171877

Molecular Weight (calculated)

18477.8 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.189

Length

181 amino acids

Sequence
(BLAST)

001: MPLSLGADHL AAPGARAPPA RVGTGMGMDT SLSLGGAAAY LPLNENDSLD MLLFDVLREA SAVAAASPSS SSSPPTKTAT AIAAAGADAI EGGGACAAGR
101: AAERPHYRGV RRRPWGKYAA EIRDPSRPGT RLWLGTFGTA EEAAVAYDRA AFRLRGAKAL LNFPPAVGAH EARRGGANEA R

Best Arabidopsis Sequence Match ( AT4G17500.1 )
(BLAST)

001: MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS
101: SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA
201: LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL TVKCEVVEVA RGDRLLVL

Arabidopsis Description

ERF1AEthylene-responsive transcription factor 1A [Source:UniProtKB/Swiss-Prot;Acc:O80337]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.