Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G505800.1 | Wheat | cytosol | 70.91 | 76.87 |
| TraesCS5B01G505000.1 | Wheat | cytosol | 66.59 | 63.32 |
| TraesCS5A01G163600.3 | Wheat | nucleus | 29.31 | 25.61 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 27.37 | 23.83 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 23.92 | 22.98 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G367600.1 | EnsemblPlantsGene:TraesCS4A01G367600 | PANTHER:PTHR33494 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr4A:-:640804606..640812287
Molecular Weight (calculated)
51922.6 Da
IEP (calculated)
6.842
GRAVY (calculated)
-0.521
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVIDWTMRG QERCWYANNE NKEEVEMSQF KKLSQSNEGY DVVNELFSWQ SIRGRGPLGL KLTKTPALLE LIQKKLTLTS KGKGKQTTCD VQTISTAIQG
101: RKPCSQKLQA SNFQASSLRI GDWEWKSIYE GDIVAKFYIS KNKLAWEILH EGLKSKIEIK CSDICALRIT CPKDLPGMLD IVVSAVPQFF IETNPQPRRS
201: TRWLATTDFT GGQASTHSRH VLQCGPGIMD KHIENLLHKD QRLYLLSQST KNSYRSNYDN LFETGQTRQS LPLQPMPTGT MTLGLNDSGA LQGVHFQSSG
301: QRAPLKEDML NWKYFLGTPL GSQPTSMSNS NAGIMYSNFG NRFDNHISSW NLSPSADYSS LREMYDLNGS HTLLPSNSNL SSETMTLEQL RENLLSDNEI
401: VNVVDEEDLM SMVNSLSCLI GKSSHSQANN NLVAPPPLDL EPTQVINVPP PGSSPPWTEW PGSP
101: RKPCSQKLQA SNFQASSLRI GDWEWKSIYE GDIVAKFYIS KNKLAWEILH EGLKSKIEIK CSDICALRIT CPKDLPGMLD IVVSAVPQFF IETNPQPRRS
201: TRWLATTDFT GGQASTHSRH VLQCGPGIMD KHIENLLHKD QRLYLLSQST KNSYRSNYDN LFETGQTRQS LPLQPMPTGT MTLGLNDSGA LQGVHFQSSG
301: QRAPLKEDML NWKYFLGTPL GSQPTSMSNS NAGIMYSNFG NRFDNHISSW NLSPSADYSS LREMYDLNGS HTLLPSNSNL SSETMTLEQL RENLLSDNEI
401: VNVVDEEDLM SMVNSLSCLI GKSSHSQANN NLVAPPPLDL EPTQVINVPP PGSSPPWTEW PGSP
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.