Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G505800.1 | Wheat | cytosol | 71.52 | 81.54 |
| TraesCS4A01G367600.1 | Wheat | cytosol | 63.32 | 66.59 |
| TraesCS5B01G160900.1 | Wheat | nucleus | 26.64 | 24.57 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 26.23 | 24.15 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 21.93 | 22.2 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G505000.1 | EnsemblPlantsGene:TraesCS5B01G505000 | PANTHER:PTHR33494 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5B:+:670924569..670932697
Molecular Weight (calculated)
54497.4 Da
IEP (calculated)
6.887
GRAVY (calculated)
-0.542
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHVVDWTAR GQEQCWYAND ENKEEEEMSQ FQKLSQSNGG DDVVNELFSW QSIHGRGPLG LNLTKTPALL ELIQKKLTLT SKGKGKQTTC DVQTISTAIQ
101: GRKPPSKKLQ ASNFQASSLR IGVWEWKSIY EGDIVAKFYI SKNKLAWEIL HEGLKSKIEI KCSDICALRI TCPKDLPGML DIMVSAVPQF FVETNPQPRR
201: STRWVATMDF TGGQASTHSR HVLQCGPGIM DKHIENLLYK DQRLYLLSQK NNINPESPCL RKGCELSVTP LRSSTENSYH SNYDNLFETG QTGQSLPLQP
301: VATGTMTLGL NDYGALQGVH FQSSGRRAPL KEDMFNRKCF LGTPLGSQPT SMSNSNAGIM NSNSGNHFDN QINSWNLSPS VDYSSLREMY DLNGSHTLLP
401: SNSNISSETM ALEQLRENFL SDNEVVNVVD EEDLMSMVNP PVLLDWTEFP LPGKQYSGCS SSSRSTNPSH QRASYWKQLT MRAITGGT
101: GRKPPSKKLQ ASNFQASSLR IGVWEWKSIY EGDIVAKFYI SKNKLAWEIL HEGLKSKIEI KCSDICALRI TCPKDLPGML DIMVSAVPQF FVETNPQPRR
201: STRWVATMDF TGGQASTHSR HVLQCGPGIM DKHIENLLYK DQRLYLLSQK NNINPESPCL RKGCELSVTP LRSSTENSYH SNYDNLFETG QTGQSLPLQP
301: VATGTMTLGL NDYGALQGVH FQSSGRRAPL KEDMFNRKCF LGTPLGSQPT SMSNSNAGIM NSNSGNHFDN QINSWNLSPS VDYSSLREMY DLNGSHTLLP
401: SNSNISSETM ALEQLRENFL SDNEVVNVVD EEDLMSMVNP PVLLDWTEFP LPGKQYSGCS SSSRSTNPSH QRASYWKQLT MRAITGGT
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.