Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G163600.3 | Wheat | nucleus | 90.74 | 90.4 |
| TraesCS5D01G168600.1 | Wheat | nucleus | 90.74 | 90.4 |
| HORVU5Hr1G050970.2 | Barley | nucleus | 88.09 | 87.27 |
| Os09t0128400-01 | Rice | nucleus | 34.4 | 82.35 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 40.45 | 40.38 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 29.3 | 32.16 |
| TraesCS5B01G505000.1 | Wheat | cytosol | 24.57 | 26.64 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G160900.1 | EnsemblPlantsGene:TraesCS5B01G160900 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5B:-:296850715..296854871
Molecular Weight (calculated)
58536.9 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.593
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLPHMGKL RRGVKEEAVD DDGGAAGAAG AEASPFHKRS RLAQQQPQQW STDGASVSNQ QSTQHDFLEE PSPLGLRLKK SPSLVDLIQM KLVQAGKAKD
101: ARHGGTASAS EKLKASNFPG SILRIGSWEW VSRYEGDLVV KCYFAKHKLV WEVLDGGLKS KIEIQWSDIC ALKVVCPETE PGTLEIALSR QPLFFRETNP
201: QPRKHTLWQA TSDFTAGQAS MHRRHFLQCA PGMMNKHVEK LVHCDPRLCS LSQQIDIKLE NPYFESRTSI FEDPDDVKCQ NFVHNKDDDD QLDPQRFREL
301: LRHHSTSGRI DAEERQEAGT SDGLPRDFSN SVTDGQVIKQ GGGSSVCEPH TSILSWNGFK LPGIRRSMSK SEIANHIGHH IYRHMYSGNL PAADGGAGTS
401: GKLAIDDITR YLLNDSQILD GGNDSTGKLA FDELTRQLLN DSQITIAADE RMLMSRVNSL CSLIHRDSGT GQVNPGVHSD NNEIYERKPQ AYAPPVEGDS
501: GNGSLPPRQE PFGDLLTHLP CISSFPHFL
101: ARHGGTASAS EKLKASNFPG SILRIGSWEW VSRYEGDLVV KCYFAKHKLV WEVLDGGLKS KIEIQWSDIC ALKVVCPETE PGTLEIALSR QPLFFRETNP
201: QPRKHTLWQA TSDFTAGQAS MHRRHFLQCA PGMMNKHVEK LVHCDPRLCS LSQQIDIKLE NPYFESRTSI FEDPDDVKCQ NFVHNKDDDD QLDPQRFREL
301: LRHHSTSGRI DAEERQEAGT SDGLPRDFSN SVTDGQVIKQ GGGSSVCEPH TSILSWNGFK LPGIRRSMSK SEIANHIGHH IYRHMYSGNL PAADGGAGTS
401: GKLAIDDITR YLLNDSQILD GGNDSTGKLA FDELTRQLLN DSQITIAADE RMLMSRVNSL CSLIHRDSGT GQVNPGVHSD NNEIYERKPQ AYAPPVEGDS
501: GNGSLPPRQE PFGDLLTHLP CISSFPHFL
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.