Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G160900.1 | Wheat | nucleus | 87.27 | 88.09 |
| TraesCS5A01G163600.3 | Wheat | nucleus | 82.21 | 82.67 |
| Os09t0128400-01 | Rice | nucleus | 33.9 | 81.9 |
| TraesCS5D01G168600.1 | Wheat | nucleus | 81.27 | 81.73 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 18.16 | 56.73 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 38.39 | 43.25 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 40.82 | 41.21 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G050970.2 | EnsemblPlantsGene:HORVU5Hr1G050970 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | SEG:seg | UniParc:UPI000B472E36 |
| UniProt:A0A287R6E9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:397822052..397826891
Molecular Weight (calculated)
59012.5 Da
IEP (calculated)
6.736
GRAVY (calculated)
-0.607
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLPHAGKL RRGVKEEAVD DDGGAAGAAG AEASPFHKRS RLAQQQPQPQ PQPQQWSTGG ASVSNQQSSQ HDFLEEPSPL GLRLKKSPSL VDLIQMKLVQ
101: AGKAKDARHG GTASASEKLK ASNFPGSILR IGSWEWISRY EGDLVVKCYF AKHKLVWEVL DGGLKSKIEI QWSDICALKV VCPETEPGTL EIALSRQPLF
201: FRETNPQPRK HTLWQATSDF TAGQASMHRR HFLQCAPGMM NKHVEKLIHC DPRLCSLSQQ NDITLENPYF ESRCSIFEEP DDIKCQNFEH DKDDDDQLAP
301: QRFRELVPHH STSSRLEAEG RHEAGTSAGL PRDFSNSVTD GQLIKQDSGS SVCEPPTSIL SWNGFKLPGI RRSMSKSEIA NQIGHHIYRQ MYSGNLPAAD
401: GGAGTSGKLA LDDITRYLLN DSQIIDGCHD STGKLAFDEL TRQLLNDSQI TIAADERMLM SRVNSLCSLI HKDSGTGQIN PGVHSNNEIY ERKPQPYAPP
501: VGGDSGNDSL PPRQEPFGDL LTHLPRISSF PHFL
101: AGKAKDARHG GTASASEKLK ASNFPGSILR IGSWEWISRY EGDLVVKCYF AKHKLVWEVL DGGLKSKIEI QWSDICALKV VCPETEPGTL EIALSRQPLF
201: FRETNPQPRK HTLWQATSDF TAGQASMHRR HFLQCAPGMM NKHVEKLIHC DPRLCSLSQQ NDITLENPYF ESRCSIFEEP DDIKCQNFEH DKDDDDQLAP
301: QRFRELVPHH STSSRLEAEG RHEAGTSAGL PRDFSNSVTD GQLIKQDSGS SVCEPPTSIL SWNGFKLPGI RRSMSKSEIA NQIGHHIYRQ MYSGNLPAAD
401: GGAGTSGKLA LDDITRYLLN DSQIIDGCHD STGKLAFDEL TRQLLNDSQI TIAADERMLM SRVNSLCSLI HKDSGTGQIN PGVHSNNEIY ERKPQPYAPP
501: VGGDSGNDSL PPRQEPFGDL LTHLPRISSF PHFL
001: MSMKRSREES QGGGNHNRFV DEGPRLNLPL TKTPELINKI ESYLKVHYTC PHQQTENSSK TSTLPKSPEK LKAMNFPIST IKIGDCVFVA KNPDDIVAKF
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QGIGGVGEGE GNFSMANGGW QRNSYSHVNS LNYNTDNGLL
301: GMQAIPPSSQ VANEHYNNTQ NDYTGSQFGY RMNQDEIQKM QRIGKILESQ AYAVPDTQTK LTSSGMNNGP MYPPAGSYLE SRLLEEWYEH TRRFQQ
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QGIGGVGEGE GNFSMANGGW QRNSYSHVNS LNYNTDNGLL
301: GMQAIPPSSQ VANEHYNNTQ NDYTGSQFGY RMNQDEIQKM QRIGKILESQ AYAVPDTQTK LTSSGMNNGP MYPPAGSYLE SRLLEEWYEH TRRFQQ
Arabidopsis Description
F10A16.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9L9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.