Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G160900.1 | Wheat | nucleus | 82.35 | 34.4 |
| TraesCS5A01G163600.3 | Wheat | nucleus | 81.9 | 34.09 |
| TraesCS5D01G168600.1 | Wheat | nucleus | 81.9 | 34.09 |
| HORVU5Hr1G050970.2 | Barley | nucleus | 81.9 | 33.9 |
| Os02t0793800-00 | Rice | cytosol | 36.65 | 27.93 |
| Os06t0186600-02 | Rice | cytosol | 33.03 | 18.72 |
Protein Annotations
| EnsemblPlants:Os09t0128400-01 | EnsemblPlantsGene:Os09g0128400 | PANTHER:PTHR33494 | ProteinID:BAF24527.1 | ProteinID:BAT06919.1 | UniParc:UPI0000DD961E |
| UniProt:Q0J3D8 | MapMan:35.2 | : | : | : | : |
Description
Conserved hypothetical protein. (Os09t0128400-01);Conserved hypothetical protein. (Os09t0128400-02)
Coordinates
chr9:-:2181578..2187453
Molecular Weight (calculated)
24503.0 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.538
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLPHQGKL RRDVKEEALD DGDAAAQAEA SPFHKRSRLA LQHWSTDGGS VSNQQSSQHG FLDEPSPLGL RLKKSPSLVD LIQMKLVQAG KAKDVQHSGT
101: ASASEKLKAS NFPGSVLRIG SWEWVSRYEG DLVAKCYFAK HKLVWEVLDG GLKSKIEIQW SDICAMKVVS PENEPGILEI ALSRQPLFFR ETNPQPRKHT
201: LWQATSDFTG GQASIHSARQ E
101: ASASEKLKAS NFPGSVLRIG SWEWVSRYEG DLVAKCYFAK HKLVWEVLDG GLKSKIEIQW SDICAMKVVS PENEPGILEI ALSRQPLFFR ETNPQPRKHT
201: LWQATSDFTG GQASIHSARQ E
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.