Factsheet for Os02t0793800-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0322800-01
Os10t0154000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G24100.1	Os01t0322800-01	AT1G73720.1	21798944
AT4G30780.1	Os10t0154000-01	AT5G22360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G040420.1	Barley	cytosol	30.34	51.46
Os09t0128400-01	Rice	nucleus	27.93	36.65
Os06t0186600-02	Rice	cytosol	45.52	33.85
CDX76839	Canola	nucleus	44.14	29.91
Bra039229.1-P	Field mustard	nucleus	43.79	29.6
CDY34799	Canola	nucleus	43.79	29.6
KXG31260	Sorghum	cytosol	50.69	29.46
Zm00001d052047_P001	Maize	nucleus	48.62	28.89
KRH58482	Soybean	mitochondrion	39.66	28.82
AT2G24100.1	Thale cress	nucleus	43.1	26.82
VIT_09s0018g01680.t01	Wine grape	cytosol	48.97	26.74
GSMUA_Achr5P04640_001	Banana	nucleus	47.59	26.69
PGSC0003DMT400036859	Potato	cytosol	47.24	26.5
KRH03001	Soybean	cytosol	44.83	26.37
PGSC0003DMT400074432	Potato	nucleus	45.86	26.23
Solyc03g117680.2.1	Tomato	cytosol	47.93	26.03
TraesCS6A01G354900.1	Wheat	mitochondrion	43.1	25.88
TraesCS6B01G387700.1	Wheat	mitochondrion	42.76	25.73
Solyc07g005990.2.1	Tomato	cytosol	46.9	25.52
KRH54987	Soybean	nucleus	46.55	25.33
KRH63129	Soybean	nucleus	46.21	25.14
VIT_11s0037g00810.t01	Wine grape	cytosol	47.93	25.14
Solyc06g068540.2.1	Tomato	cytosol	45.52	25.05
KRH72344	Soybean	cytosol	46.21	25.05
PGSC0003DMT400029158	Potato	cytosol	45.86	24.95
TraesCS6D01G337100.2	Wheat	mitochondrion	43.1	24.8
CDY23256	Canola	nucleus	44.48	23.93
AT4G30780.1	Thale cress	nucleus	47.59	23.43
CDX68693	Canola	cytosol	44.83	23.42
Bra024044.1-P	Field mustard	nucleus	45.52	23.24
CDX72268	Canola	nucleus	45.17	23.14
CDY39241	Canola	cytosol	45.17	23.1
Bra010274.1-P	Field mustard	cytosol	44.14	23.02
KRH44588	Soybean	cytosol	47.59	22.85
CDY36470	Canola	nucleus	43.45	22.74
Bra011221.1-P	Field mustard	nucleus	44.48	22.67
CDY28214	Canola	cytosol	44.48	22.55
KRH47309	Soybean	nucleus	46.55	22.54
KRH28821	Soybean	peroxisome	28.62	19.44
CDY28207	Canola	cytosol	9.66	16.47
Bra011214.1-P	Field mustard	cytosol	9.66	16.47

Protein Annotations

EnsemblPlants:Os02t0793800-00	EnsemblPlantsGene:Os02g0793800	PANTHER:PTHR33494	PANTHER:PTHR33494:SF1	ProteinID:BAS81340.1	SEG:seg
UniParc:UPI00039399FB	UniProt:A0A0P0VQJ3	MapMan:35.2	:	:	:

Description

Conserved hypothetical protein. (Os02t0793800-00)

Coordinates

chr2:+:33731759..33733654

Molecular Weight (calculated)

31806.6 Da

IEP (calculated)

4.652

GRAVY (calculated)

-0.324

Length

290 amino acids

Sequence
(BLAST)

001: MKLAMENTKK EDIKSRSLIA SERVKASNFA ADFLKIGTWE CTSQYEGDLV AKCYFAKHKL VWEVLDAGLK RKIEIQWSDI IALKATCPEN GIGTLDLVLA
101: RPPTFFKETD PQPRKHTLWQ VASDFTGASD VDLQVDVSQE LKSPHPNSLS QARSLSIDDL LSHLDDCIVE QKPAGNNPSL PISEASSNEL LEKITQQLLS
201: DSHVAPASDE KRVMARVGSL LSLLQKDAVP ANLPKFEPND SGKIGVVEVG ISSALDMGIA NGTNPPGISR KDSYEELLSN LFNISEDFDD

Best Arabidopsis Sequence Match ( AT4G30780.1 )
(BLAST)

001: MVEMRKSGGL RPESESAARC RDELPVKLEI AEDDLEEEHG PLNKRSRLWS PGTSSSTMAP AKYNPLDEPS PLGLSLKKSP SLLELIQMKI THCGDPKAAE
101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP
201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES
301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL
401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL
501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR

Arabidopsis Description

ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9SUG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.