Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G24100.1 | KXG32415 | AT1G73720.1 | 21798944 |
| AT4G30780.1 | EES13179 | AT5G22360.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052047_P001 | Maize | nucleus | 67.74 | 69.26 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 22.24 | 64.91 |
| KXG19496 | Sorghum | nucleus | 57.92 | 53.92 |
| Os02t0793800-00 | Rice | cytosol | 29.46 | 50.69 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 46.69 | 45.07 |
| Bra039229.1-P | Field mustard | nucleus | 37.68 | 43.82 |
| CDY34799 | Canola | nucleus | 37.68 | 43.82 |
| CDX76839 | Canola | nucleus | 37.27 | 43.46 |
| PGSC0003DMT400036859 | Potato | cytosol | 43.69 | 42.17 |
| Solyc03g117680.2.1 | Tomato | cytosol | 45.09 | 42.13 |
| AT2G24100.1 | Thale cress | nucleus | 39.28 | 42.06 |
| VIT_11s0037g00810.t01 | Wine grape | cytosol | 45.89 | 41.41 |
| PGSC0003DMT400074432 | Potato | nucleus | 41.48 | 40.83 |
| KRH63129 | Soybean | nucleus | 43.49 | 40.71 |
| KRH54987 | Soybean | nucleus | 43.49 | 40.71 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 39.28 | 40.58 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 39.08 | 40.46 |
| KRH03001 | Soybean | cytosol | 39.68 | 40.16 |
| VIT_09s0018g01680.t01 | Wine grape | cytosol | 42.28 | 39.74 |
| PGSC0003DMT400029158 | Potato | cytosol | 42.28 | 39.59 |
| Solyc07g005990.2.1 | Tomato | cytosol | 42.08 | 39.4 |
| Solyc06g068540.2.1 | Tomato | cytosol | 41.48 | 39.28 |
| KRH72344 | Soybean | cytosol | 41.68 | 38.88 |
| KRH58482 | Soybean | mitochondrion | 31.06 | 38.85 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 38.08 | 37.7 |
| Bra024044.1-P | Field mustard | nucleus | 41.68 | 36.62 |
| CDY39241 | Canola | cytosol | 41.08 | 36.16 |
| CDY23256 | Canola | nucleus | 38.88 | 35.99 |
| CDX72268 | Canola | nucleus | 40.68 | 35.87 |
| KRH47309 | Soybean | nucleus | 42.69 | 35.56 |
| KRH44588 | Soybean | cytosol | 42.89 | 35.43 |
| CDX68693 | Canola | cytosol | 39.28 | 35.32 |
| Bra010274.1-P | Field mustard | cytosol | 39.28 | 35.25 |
| CDY36470 | Canola | nucleus | 39.08 | 35.2 |
| Bra011221.1-P | Field mustard | nucleus | 39.68 | 34.8 |
| CDY28214 | Canola | cytosol | 39.68 | 34.62 |
| AT4G30780.1 | Thale cress | nucleus | 40.28 | 34.13 |
| CDY28207 | Canola | cytosol | 10.62 | 31.18 |
| Bra011214.1-P | Field mustard | cytosol | 10.62 | 31.18 |
| KRH28821 | Soybean | peroxisome | 26.05 | 30.45 |
Protein Annotations
| EnsemblPlants:KXG31260 | EnsemblPlantsGene:SORBI_3004G327900 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | ProteinID:KXG31260 | ProteinID:KXG31260.1 |
| SEG:seg | UniParc:UPI0007F23365 | UniProt:A0A194YTT9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:66247022..66250084
Molecular Weight (calculated)
55275.3 Da
IEP (calculated)
5.381
GRAVY (calculated)
-0.504
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLPRSGKRC AEPATAATAK AEMEVFGGGD GAPHKRVKPL PPPPPQAFRS DLSCDVLDEP SPLGLRLRKS PSLLDLIQTK LSQAKSASEQ FDVHNNVSDT
101: PMKKEVRSGA PTAGERPKAS NFPANVLRIG SWEYISHYEG DLVAKCYFAK HKLVWEVLHD GLKSKIEIQW SDIIALKATC PENEQEGILD LVLARPPLFF
201: KETNPQPRKH TLWQAASDFT DGQASVNRRH TLQCPSSLLS KNFEKLIQCD HRLHELSQQP AAILQTPHFE PKRSIFENPN ESKDCFDLNG LKYEHEATLP
301: KFTDPVSTCV FSSLSKNVGQ PMNIGFGAGD FEGTVSEEPK NCNQWNQFKV PGLKASISVE DLVNHLGNCR ADQRSVSDPP LTINDGKSKE VLEDLVQYLF
401: SDTHSLPASD DKYLMARVDS LYSLLEKDTV PAAICKPECS DDIGINFDGF EEELNSSLAG AKEPLTISRK DSFGELLLNL PPEPSIPQFL FNLAENSEK
101: PMKKEVRSGA PTAGERPKAS NFPANVLRIG SWEYISHYEG DLVAKCYFAK HKLVWEVLHD GLKSKIEIQW SDIIALKATC PENEQEGILD LVLARPPLFF
201: KETNPQPRKH TLWQAASDFT DGQASVNRRH TLQCPSSLLS KNFEKLIQCD HRLHELSQQP AAILQTPHFE PKRSIFENPN ESKDCFDLNG LKYEHEATLP
301: KFTDPVSTCV FSSLSKNVGQ PMNIGFGAGD FEGTVSEEPK NCNQWNQFKV PGLKASISVE DLVNHLGNCR ADQRSVSDPP LTINDGKSKE VLEDLVQYLF
401: SDTHSLPASD DKYLMARVDS LYSLLEKDTV PAAICKPECS DDIGINFDGF EEELNSSLAG AKEPLTISRK DSFGELLLNL PPEPSIPQFL FNLAENSEK
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.