Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400036859 | Potato | cytosol | 84.08 | 86.85 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 18.35 | 57.31 |
| Solyc06g068540.2.1 | Tomato | cytosol | 55.81 | 56.55 |
| VIT_09s0018g01680.t01 | Wine grape | cytosol | 54.12 | 54.43 |
| Solyc07g005990.2.1 | Tomato | cytosol | 51.69 | 51.78 |
| Os06t0186600-02 | Rice | cytosol | 37.08 | 50.77 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 43.26 | 48.73 |
| KXG19496 | Sorghum | nucleus | 48.5 | 48.32 |
| GSMUA_Achr9P22760_001 | Banana | nucleus | 48.13 | 48.31 |
| Os02t0793800-00 | Rice | cytosol | 26.03 | 47.93 |
| Zm00001d037085_P005 | Maize | nucleus | 47.94 | 47.5 |
| Zm00001d045084_P002 | Maize | cytosol | 47.57 | 47.21 |
| KRH44588 | Soybean | cytosol | 53.37 | 47.19 |
| KRH47309 | Soybean | nucleus | 52.43 | 46.74 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 46.25 | 46.69 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 45.13 | 46.62 |
| GSMUA_Achr4P05930_001 | Banana | cytosol | 46.25 | 46.17 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 45.69 | 46.04 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 45.69 | 45.78 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 45.69 | 45.78 |
| KXG31260 | Sorghum | cytosol | 42.13 | 45.09 |
| Zm00001d052047_P001 | Maize | nucleus | 39.7 | 43.44 |
| GSMUA_Achr4P12730_001 | Banana | mitochondrion | 46.82 | 42.88 |
| GSMUA_Achr4P11470_001 | Banana | plasma membrane | 43.45 | 41.13 |
| KRH28821 | Soybean | peroxisome | 32.4 | 40.52 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 33.71 | 37.27 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 33.15 | 36.72 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 31.84 | 33.73 |
| Solyc01g100440.1.1 | Tomato | nucleus | 23.22 | 23.85 |
Protein Annotations
| EnsemblPlants:Solyc03g117680.2.1 | EnsemblPlantsGene:Solyc03g117680.2 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | SEG:seg | UniParc:UPI0002767877 |
| UniProt:K4BLR9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:66750965..66754656
Molecular Weight (calculated)
59583.5 Da
IEP (calculated)
5.694
GRAVY (calculated)
-0.582
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQLMRTTME ESPELQWQKG KNAAVKLEFE DALDEAYGPL SKRSKLSSSS LQQLVVEADG FPVPPSQYNP LDEPSPLGLR LRKSPSLLDL IQMKLSQGNN
101: AKVGNQGKKE QKGNTGTIEK LKASNFPATV LRIGSWEYKS RYEGDLVAKC YFAKHKLVWE VLDGGLKNKI EIQWSDIMGL KANYPDDGPG TLDVVLSRQP
201: LFFRETNPQP RKHTLWQATS DFTGGQASMH KRHYLQIPQG LLGKHFEKLI QCDPRLNFLS QQPEIILDSP HFETRISVFE DPNVCESEFN LNNERSPPFL
301: NLHGAASPSG AHCSSTNGEQ DFVVSRRLEN IRPETPSPSS VMDTRAIQDV SRDMEQLKGL GNLDQIRVPG LHPSMSMKDL VSHFEQRFSE QGTSEVISLS
401: SDELQSLEIL EEISRCLFSD TQNMPASDEK SLMTRVNSLC CLLQKDPATA HKSENYGGVA VGGKRTDELI SFFPGATCGK KVEDPSTSED KSNDPAPSMS
501: RKDSIGDLLL NLPRIASLPQ FLFNIYEDSD RPAR
101: AKVGNQGKKE QKGNTGTIEK LKASNFPATV LRIGSWEYKS RYEGDLVAKC YFAKHKLVWE VLDGGLKNKI EIQWSDIMGL KANYPDDGPG TLDVVLSRQP
201: LFFRETNPQP RKHTLWQATS DFTGGQASMH KRHYLQIPQG LLGKHFEKLI QCDPRLNFLS QQPEIILDSP HFETRISVFE DPNVCESEFN LNNERSPPFL
301: NLHGAASPSG AHCSSTNGEQ DFVVSRRLEN IRPETPSPSS VMDTRAIQDV SRDMEQLKGL GNLDQIRVPG LHPSMSMKDL VSHFEQRFSE QGTSEVISLS
401: SDELQSLEIL EEISRCLFSD TQNMPASDEK SLMTRVNSLC CLLQKDPATA HKSENYGGVA VGGKRTDELI SFFPGATCGK KVEDPSTSED KSNDPAPSMS
501: RKDSIGDLLL NLPRIASLPQ FLFNIYEDSD RPAR
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.