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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr6P25450_001
GSMUA_Achr9P08610_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G24100.1 GSMUA_Achr6P25450_001 AT1G73720.1 21798944
AT2G24100.1 GSMUA_Achr9P08610_001 AT1G73720.1 21798944
AT4G30780.1 GSMUA_Achr10P... AT5G22360.1 21798944
AT4G30780.1 GSMUA_Achr11P... AT5G22360.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G040420.1 Barley cytosol 20.31 61.4
Os06t0186600-02 Rice cytosol 41.78 55.38
HORVU3Hr1G034290.1 Barley cytosol 50.1 54.64
HORVU7Hr1G031130.2 Barley nucleus 54.16 52.93
TraesCS7B01G055300.1 Wheat cytosol 54.16 52.83
Zm00001d045084_P002 Maize cytosol 54.16 52.04
KXG19496 Sorghum nucleus 53.58 51.68
Zm00001d037085_P005 Maize nucleus 53.77 51.58
TraesCS7D01G153200.1 Wheat nucleus 52.8 51.22
TraesCS7A01G151300.1 Wheat nucleus 52.61 51.03
GSMUA_Achr9P22760_001 Banana nucleus 51.84 50.38
GSMUA_Achr4P05930_001 Banana cytosol 51.84 50.09
VIT_11s0037g00810.t01 Wine grape cytosol 53.58 50.09
KRH54987 Soybean nucleus 51.26 49.72
KRH63129 Soybean nucleus 51.06 49.53
CDX76839 Canola nucleus 40.04 48.36
CDY34799 Canola nucleus 39.65 47.79
Bra039229.1-P Field mustard nucleus 39.65 47.79
Solyc07g005990.2.1 Tomato cytosol 49.13 47.65
Os02t0793800-00 Rice cytosol 26.69 47.59
PGSC0003DMT400029158 Potato cytosol 48.55 47.09
PGSC0003DMT400036859 Potato cytosol 46.81 46.81
KXG31260 Sorghum cytosol 45.07 46.69
AT2G24100.1 Thale cress nucleus 41.59 46.14
GSMUA_Achr4P12730_001 Banana mitochondrion 51.84 45.97
KRH72344 Soybean cytosol 46.81 45.23
Solyc03g117680.2.1 Tomato cytosol 46.62 45.13
VIT_09s0018g01680.t01 Wine grape cytosol 45.84 44.63
Zm00001d052047_P001 Maize nucleus 41.59 44.06
KRH03001 Soybean cytosol 41.78 43.81
PGSC0003DMT400074432 Potato nucleus 42.75 43.59
KRH58482 Soybean mitochondrion 33.08 42.86
Solyc06g068540.2.1 Tomato cytosol 42.55 41.75
CDY28207 Canola cytosol 13.54 41.18
Bra011214.1-P Field mustard cytosol 13.54 41.18
KRH44588 Soybean cytosol 47.97 41.06
KRH47309 Soybean nucleus 47.2 40.73
GSMUA_Achr4P11470_001 Banana plasma membrane 43.91 40.25
CDX68693 Canola cytosol 42.55 39.64
Bra024044.1-P Field mustard nucleus 43.13 39.26
Bra011221.1-P Field mustard nucleus 43.13 39.19
CDY28214 Canola cytosol 43.13 38.99
CDY39241 Canola cytosol 42.55 38.8
AT4G30780.1 Thale cress nucleus 43.71 38.37
CDX72268 Canola nucleus 41.78 38.16
TraesCS6A01G354900.1 Wheat mitochondrion 35.2 37.68
CDY23256 Canola nucleus 39.07 37.48
CDY36470 Canola nucleus 40.04 37.36
Bra010274.1-P Field mustard cytosol 39.85 37.05
TraesCS6B01G387700.1 Wheat mitochondrion 34.24 36.72
KRH28821 Soybean peroxisome 30.17 36.53
TraesCS6D01G337100.2 Wheat mitochondrion 35.4 36.31
GSMUA_Achr11P... Banana cytosol 16.25 24.85
Protein Annotations
EnsemblPlants:GSMUA_Achr5P04640_001EnsemblPlants:GSMUA_Achr5T04640_001EnsemblPlantsGene:GSMUA_Achr5G04640_001PANTHER:PTHR33494PANTHER:PTHR33494:SF1SEG:seg
UniParc:UPI00029644E0UniProt:M0SVP3MapMan:35.2:::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G04640_001]
Coordinates
chr5:-:3400793..3410731
Molecular Weight (calculated)
57062.5 Da
IEP (calculated)
4.830
GRAVY (calculated)
-0.629
Length
517 amino acids
Sequence
(BLAST)
001: MVQLPDAGKR RVDSTPHAAP EAAAVKLEIE DPLVDEHGPL NKRSKDASYP NQQAMYYNVL EEPGPLGLRL RKSPSLADLI QMRLSQAKSG GTSCATSLGS
101: SEVGDNKELK SSAASSSSNK IKASNFPATL LRIGTWERVS RYEGDLVAKC YFAKHKLVWE VLEGGLKSKI EFHWSDITAI KATFSEGGHG TLDIVLARPP
201: LFFRETDPQP RKHTLWQATQ DFTNGQASIY RRHLLQCPQG LLSKNFEKLI DCDPRLKLLS QQPDVLDSPY FEPQYSVFED HSDSKSHILD GSKEDCGATF
301: SGFCESGSPC ATSSLSNKSE VRDSFGRTPD FDPQDTPSPC SGVEARSTEE NNTSKETEER GPDWWEQLKL PGLRGSMSMT DLVNHLGQHI SEQMTSVNPS
401: LPSDALPNKE VLEDIAQYLL NDSQCSATSD EQSIISRVNS LCCLLQKDNR TGTTQNSQTK DSAEAQVDAG SDDELVDAAQ PPITRKESFG ELLILPRIAS
501: MPKFLFNISE DEEKETR
Best Arabidopsis Sequence Match ( AT2G24100.1 )
(BLAST)
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.