Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039229.1-P | Field mustard | nucleus | 67.38 | 73.19 |
| CDY34799 | Canola | nucleus | 66.74 | 72.49 |
| CDX76839 | Canola | nucleus | 66.31 | 72.2 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 20.39 | 55.56 |
| AT4G30780.1 | Thale cress | nucleus | 62.66 | 49.58 |
| KRH54987 | Soybean | nucleus | 55.79 | 48.78 |
| KRH63129 | Soybean | nucleus | 55.58 | 48.59 |
| VIT_11s0037g00810.t01 | Wine grape | cytosol | 57.08 | 48.1 |
| KRH03001 | Soybean | cytosol | 47.21 | 44.62 |
| Solyc07g005990.2.1 | Tomato | cytosol | 50.64 | 44.28 |
| GSMUA_Achr9P22760_001 | Banana | nucleus | 50.43 | 44.17 |
| PGSC0003DMT400029158 | Potato | cytosol | 50.43 | 44.09 |
| Os06t0186600-02 | Rice | cytosol | 36.7 | 43.85 |
| Os02t0793800-00 | Rice | cytosol | 26.82 | 43.1 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 43.78 | 43.04 |
| KRH72344 | Soybean | cytosol | 49.36 | 42.99 |
| GSMUA_Achr4P05930_001 | Banana | cytosol | 48.5 | 42.24 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 46.14 | 41.59 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 46.78 | 41.21 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 46.35 | 40.53 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 46.35 | 40.53 |
| Zm00001d037085_P005 | Maize | nucleus | 46.57 | 40.26 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 45.71 | 40.19 |
| KXG19496 | Sorghum | nucleus | 45.92 | 39.93 |
| Zm00001d045084_P002 | Maize | cytosol | 45.92 | 39.78 |
| KXG31260 | Sorghum | cytosol | 42.06 | 39.28 |
| GSMUA_Achr4P12730_001 | Banana | mitochondrion | 48.93 | 39.11 |
| KRH58482 | Soybean | mitochondrion | 33.05 | 38.6 |
| Zm00001d052047_P001 | Maize | nucleus | 39.7 | 37.91 |
| GSMUA_Achr4P11470_001 | Banana | plasma membrane | 43.99 | 36.35 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 36.48 | 35.27 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 34.98 | 33.75 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 34.76 | 32.14 |
| AT1G54300.1 | Thale cress | cytosol, nucleus, vacuole | 18.67 | 27.71 |
| AT3G05770.1 | Thale cress | nucleus | 21.24 | 24.15 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816944 | ProteinID:AEC07529.1 | ArrayExpress:AT2G24100 | EnsemblPlantsGene:AT2G24100 | RefSeq:AT2G24100 |
| TAIR:AT2G24100 | RefSeq:AT2G24100-TAIR-G | EnsemblPlants:AT2G24100.1 | TAIR:AT2G24100.1 | EMBL:AY042896 | EMBL:AY054224 |
| EMBL:BT008764 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0016787 | RefSeq:NP_565562.2 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | UniProt:Q9ZUI1 | UniParc:UPI00000A1086 | SEG:seg |
Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
Coordinates
chr2:+:10244745..10246994
Molecular Weight (calculated)
52214.7 Da
IEP (calculated)
6.163
GRAVY (calculated)
-0.526
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.