Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72344 | Soybean | cytosol | 84.96 | 63.36 |
| KRH03001 | Soybean | cytosol | 63.66 | 51.52 |
| KRH63129 | Soybean | nucleus | 64.16 | 48.03 |
| KRH54987 | Soybean | nucleus | 62.41 | 46.72 |
| Os06t0186600-02 | Rice | cytosol | 40.6 | 41.54 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 17.29 | 40.35 |
| Os02t0793800-00 | Rice | cytosol | 28.82 | 39.66 |
| VIT_11s0037g00810.t01 | Wine grape | cytosol | 52.63 | 37.97 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 43.11 | 36.29 |
| Solyc07g005990.2.1 | Tomato | cytosol | 47.62 | 35.65 |
| PGSC0003DMT400029158 | Potato | cytosol | 47.37 | 35.46 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 42.86 | 33.08 |
| AT2G24100.1 | Thale cress | nucleus | 38.6 | 33.05 |
| CDX76839 | Canola | nucleus | 35.09 | 32.71 |
| Zm00001d045084_P002 | Maize | cytosol | 43.86 | 32.53 |
| CDY34799 | Canola | nucleus | 34.84 | 32.4 |
| Bra039229.1-P | Field mustard | nucleus | 34.84 | 32.4 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 42.86 | 32.26 |
| GSMUA_Achr4P05930_001 | Banana | cytosol | 43.11 | 32.15 |
| GSMUA_Achr9P22760_001 | Banana | nucleus | 42.61 | 31.95 |
| Zm00001d037085_P005 | Maize | nucleus | 43.11 | 31.91 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 42.11 | 31.76 |
| KXG19496 | Sorghum | nucleus | 42.11 | 31.34 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 41.6 | 31.14 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 41.6 | 31.14 |
| KXG31260 | Sorghum | cytosol | 38.85 | 31.06 |
| GSMUA_Achr4P12730_001 | Banana | mitochondrion | 43.61 | 29.85 |
| CDY23256 | Canola | nucleus | 39.85 | 29.5 |
| KRH28821 | Soybean | peroxisome | 31.33 | 29.27 |
| KRH47309 | Soybean | nucleus | 43.61 | 29.05 |
| KRH44588 | Soybean | cytosol | 43.86 | 28.97 |
| Bra010274.1-P | Field mustard | cytosol | 40.1 | 28.78 |
| AT4G30780.1 | Thale cress | nucleus | 42.11 | 28.52 |
| CDY36470 | Canola | nucleus | 39.6 | 28.52 |
| Zm00001d052047_P001 | Maize | nucleus | 34.59 | 28.28 |
| Bra024044.1-P | Field mustard | nucleus | 40.1 | 28.17 |
| CDX68693 | Canola | cytosol | 39.1 | 28.11 |
| CDY39241 | Canola | cytosol | 39.85 | 28.04 |
| CDX72268 | Canola | nucleus | 39.6 | 27.92 |
| Bra011221.1-P | Field mustard | nucleus | 39.1 | 27.42 |
| CDY28214 | Canola | cytosol | 39.1 | 27.27 |
| GSMUA_Achr4P11470_001 | Banana | plasma membrane | 34.84 | 24.65 |
| KRH33824 | Soybean | nucleus | 17.29 | 24.3 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 29.32 | 24.27 |
| KRG90540 | Soybean | nucleus | 16.79 | 24.01 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 28.82 | 23.81 |
| KRH30889 | Soybean | cytosol | 14.29 | 23.17 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 28.32 | 22.42 |
| CDY28207 | Canola | cytosol | 5.76 | 13.53 |
| Bra011214.1-P | Field mustard | cytosol | 5.76 | 13.53 |
Protein Annotations
| EMBL:ACUP02003265 | EnsemblPlants:KRH58482 | EnsemblPlantsGene:GLYMA_05G130800 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | ProteinID:KRH58482 |
| ProteinID:KRH58482.1 | UniParc:UPI0002953177 | UniProt:K7KPY6 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr5:-:32391151..32396609
Molecular Weight (calculated)
44798.1 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.476
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: FMVSLSPRQY TVQRTNVQNV NSTSPTGSRN HIENFVASNF PASLLRIGSR EYKSKHEGDL VAKCYFAKHK LVWEVLEGEL KNKMEIQWSD IMALKANCLD
101: TGPSLLTVVL ARQPLLFKET NPQPRKHTIW QPTSDFTEGE ACKHRQHFLE FPQGLLAKHF EKLIQCDTHL NFLSQQPEII LDSPHFGTRP AAFENLDNPE
201: DPDLHLVNCK GSTTSCLQDI GSPHSSLSPS FKIEHNDLLG IASNNLPCEA PFPSSGSTSS ETDFKGPRNW DQIKLPRLRP SMAVSDFIGH IEHCLFEQIT
301: SGNPSFCGGR LEFQEMLEEI AQHLLNDNKV ITTSDEKSLM TRVNSLCCLL QKDPAALQSS HDKESADEGP ADGKSIQLSH DLESMQNNKI KIWVMPLKL
101: TGPSLLTVVL ARQPLLFKET NPQPRKHTIW QPTSDFTEGE ACKHRQHFLE FPQGLLAKHF EKLIQCDTHL NFLSQQPEII LDSPHFGTRP AAFENLDNPE
201: DPDLHLVNCK GSTTSCLQDI GSPHSSLSPS FKIEHNDLLG IASNNLPCEA PFPSSGSTSS ETDFKGPRNW DQIKLPRLRP SMAVSDFIGH IEHCLFEQIT
301: SGNPSFCGGR LEFQEMLEEI AQHLLNDNKV ITTSDEKSLM TRVNSLCCLL QKDPAALQSS HDKESADEGP ADGKSIQLSH DLESMQNNKI KIWVMPLKL
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.