Skip to main content
crop-pal logo
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH62407 Soybean endoplasmic reticulum, extracellular 97.37 92.5
KRH71579 Soybean cytosol 52.63 27.65
GSMUA_Achr6P25450_001 Banana nucleus 74.56 19.81
HORVU0Hr1G006640.1 Barley cytosol 71.05 17.8
KRH43068 Soybean nucleus 79.82 17.74
KRH59198 Soybean endoplasmic reticulum 79.82 17.74
GSMUA_Achr9P08610_001 Banana cytosol 74.56 16.57
VIT_17s0000g08930.t01 Wine grape cytosol 74.56 16.54
PGSC0003DMT400013292 Potato cytosol 74.56 16.54
Solyc06g064830.2.1 Tomato nucleus 74.56 16.54
AT1G73720.1 Thale cress cytosol 71.93 16.05
TraesCS3B01G226600.1 Wheat cytosol 71.93 15.89
TraesCS3D01G200300.1 Wheat cytosol 71.93 15.86
Os01t0322800-01 Rice nucleus 71.93 15.86
TraesCS3A01G197200.1 Wheat nucleus 71.93 15.86
Bra015971.1-P Field mustard cytosol 70.18 15.62
CDY60136 Canola cytosol 70.18 15.62
CDX73008 Canola cytosol 70.18 15.62
KXG32415 Sorghum cytosol 70.18 15.47
Zm00001d040689_P001 Maize cytosol 71.93 14.7
Protein Annotations
Gene3D:2.130.10.10MapMan:35.1UniProt:A0A0R0K8H6EMBL:ACUP02002565EnsemblPlantsGene:GLYMA_04G149500GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986EnsemblPlants:KRH63018
ProteinID:KRH63018ProteinID:KRH63018.1PFAM:PF00400PFscan:PS50082PFscan:PS50294PANTHER:PTHR22848
PANTHER:PTHR22848:SF0SMART:SM00320SUPFAM:SSF50978SignalP:SignalP-noTMUniParc:UPI0006ED8DB2InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeatInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf:::
Description
hypothetical protein
Coordinates
chr4:-:31883338..31886029
Molecular Weight (calculated)
13179.9 Da
IEP (calculated)
6.779
GRAVY (calculated)
-0.004
Length
114 amino acids
Sequence
(BLAST)
001: MHPLLLFAFF SILRTMTWVW DYISGKLKKD LQYQADEVFM MHDDVVLCVD FSTDSEMLSS GSQDGKIKVW RIRTGQCLQR LERVHSQGVT SVSFSRDGSQ
101: LLITSFDSTA RFFI
Best Arabidopsis Sequence Match ( AT1G73720.1 )
(BLAST)
001: MALEIEARDV IKIMLQFCKE NSLNQTFQTL QSECQVSLNT VDSVETFISD INSGRWDSVL PQVSQLKLPR NKLEDLYEQI VLEMIELREL DTARAILRQT
101: QVMGVMKQEQ AERYLRMEHL LVRSYFDPHE AYGDSTKERK RAQIAQAVAA EVTVVPPSRL MALIGQALKW QQHQGLLPPG TQFDLFRGTA AMKQDVEDTH
201: PNVLTHTIKF GKKSHAECAR FSPDGQFLAS SSVDGFIEVW DYISGKLKKD LQYQADESFM MHDDPVLCID FSRDSEMLAS GSQDGKIKIW RIRTGVCIRR
301: FDAHSQGVTS LSFSRDGSQL LSTSFDQTAR IHGLKSGKLL KEFRGHTSYV NHAIFTSDGS RIITASSDCT VKVWDSKTTD CLQTFKPPPP LRGTDASVNS
401: IHLFPKNTEH IVVCNKTSSI YIMTLQGQVV KSFSSGNREG GDFVAACVST KGDWIYCIGE DKKLYCFNYQ SGGLEHFMMV HEKDVIGITH HPHRNLLATY
501: SEDCTMKLWK P
Arabidopsis Description
SMU1SMU1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHG8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.