CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90540	Soybean	nucleus	76.06	77.42
KRH30889	Soybean	cytosol	29.58	34.15
CDY25203	Canola	cytosol	24.3	28.63
Bra018890.1-P	Field mustard	nucleus	22.54	26.02
CDY22822	Canola	nucleus	22.54	26.02
Bra001166.1-P	Field mustard	mitochondrion	16.2	25.56
AT1G54300.1	Thale cress	cytosol, nucleus, vacuole	23.59	21.34
AT3G05770.1	Thale cress	nucleus	28.87	20.0
CDY14664	Canola	cytosol	27.11	18.97
CDY05199	Canola	nucleus	26.76	18.95
GSMUA_Achr11P...	Banana	cytosol	22.54	18.93
CDX74132	Canola	cytosol	26.41	18.7
Solyc01g100440.1.1	Tomato	nucleus	32.04	17.5
KRH58482	Soybean	mitochondrion	24.3	17.29
KRH03001	Soybean	cytosol	28.87	16.63
KRH63129	Soybean	nucleus	30.28	16.14
KRH44588	Soybean	cytosol	33.8	15.89
KRH54987	Soybean	nucleus	29.58	15.76
KRH47309	Soybean	nucleus	33.1	15.69
KRH72344	Soybean	cytosol	29.23	15.51
PGSC0003DMT400007166	Potato	nucleus	32.04	15.4
CDY27740	Canola	plastid	26.76	14.9
Bra039411.1-P	Field mustard	plastid	26.76	14.87
VIT_14s0060g01240.t01	Wine grape	cytosol	32.04	14.61
KRH28821	Soybean	peroxisome	17.96	11.94
Bra001165.1-P	Field mustard	mitochondrion	7.75	9.57

Protein Annotations

EMBL:ACUP02006558	EnsemblPlants:KRH33824	EnsemblPlantsGene:GLYMA_10G147300	EntrezGene:100787534	PANTHER:PTHR33494	PANTHER:PTHR33494:SF5
ProteinID:KRH33824	ProteinID:KRH33824.1	SEG:seg	UniParc:UPI000294B151	UniProt:K7LJG8	MapMan:35.2

Description

hypothetical protein

Coordinates

chr10:-:38260082..38263381

Molecular Weight (calculated)

33040.1 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.514

Length

284 amino acids

Sequence
(BLAST)

001: MAHSTGSDDS VCQGFALTTQ QEIAMANSYQ YNSSDNQFLY FSYLRDEDHH QYIDDDDDEQ TAYKRALKEF SQLPPLLGLK ITMTPEMLQP TKTSQVAANN
101: KVEKLKAVQF PMDMLRIGYF KIEAKYPYEL VAKCYYARQK LIWEILHDGL KFKIEIHCQN ISAIRAVMEE NSPGILEIEL DKVPSFFREI DPKPKKHTTW
201: TISHDFTDGQ ASEYRRHYLQ FPHGVLDQHY IKLLQSDNRL LELSLRPFPS SHFAYFSSHL DQGTTQFSFG HDPHAIAYTY SLML

Best Arabidopsis Sequence Match ( AT1G54300.1 )
(BLAST)

001: MNFPISTIRI GGWVVVAKNP DDIVAKFYFA KKKLIWEFLF GEPETNTLRL KRKIEIQWND VSSFEESISS RDETGILKIE LKKRPTFFIE TNPQAGKHTQ
101: WKQLDHDFTG DHASNYRRHT LHFPPGVLQK NLEKLVTDSF WSKLYEVPFP VHESRYFDSG FENNSSRNSH SHTVGFNVNN GPQHHFSQGI GGVGVGEGNF
201: SMANGGWQRN SYSPVNSLNY NTANEFFGMQ ATPPSSQVVN EHYNTQNDFT GSQFGYHMNQ DEIQKILESQ AYAVPDTQTK LMSSAMNNVP KYPQAGSCLE
301: SMLFWYEHRR RFQQ

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05770.1); Has 107 Blast hits to 107 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 13 (sou /.../CBI BLink). [Source:TAIR;Acc:AT1G54300]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.