Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33824 | Soybean | nucleus | 14.61 | 32.04 |
| KRG90540 | Soybean | nucleus | 14.13 | 31.54 |
| Bra018890.1-P | Field mustard | nucleus | 11.72 | 29.67 |
| CDY22822 | Canola | nucleus | 11.72 | 29.67 |
| CDY25203 | Canola | cytosol | 11.24 | 29.05 |
| KRH30889 | Soybean | cytosol | 11.4 | 28.86 |
| GSMUA_Achr11P... | Banana | cytosol | 15.09 | 27.81 |
| VIT_11s0037g00810.t01 | Wine grape | cytosol | 22.95 | 25.86 |
| VIT_09s0018g01680.t01 | Wine grape | cytosol | 21.99 | 25.8 |
| AT1G54300.1 | Thale cress | cytosol, nucleus, vacuole | 12.68 | 25.16 |
| Bra001166.1-P | Field mustard | mitochondrion | 7.22 | 25.0 |
| CDX74132 | Canola | cytosol | 15.73 | 24.44 |
| Solyc01g100440.1.1 | Tomato | nucleus | 20.39 | 24.42 |
| AT3G05770.1 | Thale cress | nucleus | 15.57 | 23.66 |
| CDY05199 | Canola | nucleus | 15.09 | 23.44 |
| CDY14664 | Canola | cytosol | 14.77 | 22.66 |
| PGSC0003DMT400007166 | Potato | nucleus | 20.71 | 21.83 |
| Bra001165.1-P | Field mustard | mitochondrion | 6.26 | 16.96 |
| CDY27740 | Canola | plastid | 13.8 | 16.86 |
| Bra039411.1-P | Field mustard | plastid | 13.8 | 16.83 |
Protein Annotations
| ArrayExpress:VIT_14s0060g01240 | EMBL:AM468301 | EMBL:FN596746 | EnsemblPlants:VIT_14s0060g01240.t01 | EnsemblPlantsGene:VIT_14s0060g01240 | EntrezGene:100249402 |
| EntrezGene:LOC100249402 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF5 | ProteinID:CAN72622 | ProteinID:CAN72622.1 | ProteinID:CCB61910 |
| ProteinID:CCB61910.1 | RefSeq:XP_002277974 | RefSeq:XP_002277974.1 | SEG:seg | UniParc:UPI00021099A7 | UniProt:F6I4S3 |
| wikigene:100249402 | wikigene:LOC100249402 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr14:+:995776..998496
Molecular Weight (calculated)
70349.8 Da
IEP (calculated)
5.116
GRAVY (calculated)
-0.662
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MVENPNPLGL TLRKTSSLLN LIETSLAKKK RTYSELNQGS DYLNQYRIQP KRHDFVLPQS SEKLKATNFP ALLLQIGSWV RESRYEGHLI AKCYYSKRKL
101: VWEILEGSLK KKIEIQWSDI SALRTICIEN DPTILELELK NQPQYFGETN PQPRKHTLWQ RIPDFTGGQA PVYRRHLLKF PPGVLGKQFE KLLQCDNRLY
201: TLSLEPFPNF SYPFFPPSNN NELNFSKGHR PEKAPRLLLS PSSNPTSLAP AQPLQTFKQT SVQPAGSWDS TSPMSVMEFS PIDEAGNNHG AKKPKAAFWG
301: QGVSMVTGNT VSGFSGRGEV QGIPYIVPAI QANQDYGLQD CQAPNHSQNE ELGGLDGRDP FMRNADEHLL DDTQAACSDE ETLLAKVRSM GSLIQPEQQV
401: QPADGNNRNE MGFGEDINQA EEPVQPAAEM EFGGEILADQ NPLEKSDNER ELNMTNEQFL LLSEMQYAPE LLASPQFVSQ TTNMDFGQEI VPAHELLANP
501: QFVSQNTNME FRQETVPRHH FPVFIENQQP NFQTVHWVPR PQFPNHLVLS QENQLILNAP PPQVLGENQM MHFEGNNNLI ASQFLNGNEL MQHNCSRPSY
601: PYNFPGTEGD NFGNINGGNQ YWG
101: VWEILEGSLK KKIEIQWSDI SALRTICIEN DPTILELELK NQPQYFGETN PQPRKHTLWQ RIPDFTGGQA PVYRRHLLKF PPGVLGKQFE KLLQCDNRLY
201: TLSLEPFPNF SYPFFPPSNN NELNFSKGHR PEKAPRLLLS PSSNPTSLAP AQPLQTFKQT SVQPAGSWDS TSPMSVMEFS PIDEAGNNHG AKKPKAAFWG
301: QGVSMVTGNT VSGFSGRGEV QGIPYIVPAI QANQDYGLQD CQAPNHSQNE ELGGLDGRDP FMRNADEHLL DDTQAACSDE ETLLAKVRSM GSLIQPEQQV
401: QPADGNNRNE MGFGEDINQA EEPVQPAAEM EFGGEILADQ NPLEKSDNER ELNMTNEQFL LLSEMQYAPE LLASPQFVSQ TTNMDFGQEI VPAHELLANP
501: QFVSQNTNME FRQETVPRHH FPVFIENQQP NFQTVHWVPR PQFPNHLVLS QENQLILNAP PPQVLGENQM MHFEGNNNLI ASQFLNGNEL MQHNCSRPSY
601: PYNFPGTEGD NFGNINGGNQ YWG
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.