Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- plastid 1
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14664 | Canola | cytosol | 75.56 | 33.5 |
| Bra018890.1-P | Field mustard | nucleus | 32.78 | 23.98 |
| KRG90540 | Soybean | nucleus | 25.56 | 16.49 |
| KRH33824 | Soybean | nucleus | 25.56 | 16.2 |
| AT3G05770.1 | Thale cress | nucleus | 35.0 | 15.37 |
| Bra039411.1-P | Field mustard | plastid | 42.22 | 14.87 |
| Bra011214.1-P | Field mustard | cytosol | 13.89 | 14.71 |
| KRH30889 | Soybean | cytosol | 17.78 | 13.01 |
| AT1G54300.1 | Thale cress | cytosol, nucleus, vacuole | 22.22 | 12.74 |
| Bra039229.1-P | Field mustard | nucleus | 25.56 | 10.72 |
| GSMUA_Achr11P... | Banana | cytosol | 19.44 | 10.36 |
| Bra024044.1-P | Field mustard | nucleus | 29.44 | 9.33 |
| Solyc01g100440.1.1 | Tomato | nucleus | 26.11 | 9.04 |
| Bra010274.1-P | Field mustard | cytosol | 26.11 | 8.45 |
| Bra011221.1-P | Field mustard | nucleus | 25.0 | 7.91 |
| PGSC0003DMT400007166 | Potato | nucleus | 23.89 | 7.28 |
| VIT_14s0060g01240.t01 | Wine grape | cytosol | 25.0 | 7.22 |
| Bra001165.1-P | Field mustard | mitochondrion | 1.67 | 1.3 |
Protein Annotations
Description
AT3G05770 (E=2e-021) | unknown protein
Coordinates
chrA03:-:15068407..15071400
Molecular Weight (calculated)
20720.6 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.460
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MARDNGVVRL RGVFAAFLLR PDCRDKGAAL AWGEGLFPPL NLLFTPTPEL IALIEIELQQ DYSSPHQQNF HYTTEHPKTL TPSETPKNHE KLKAVDSQIY
101: KITIGQWTHT RVYPDDIKAK FYFAKKRIIW EILDDVETGT QVERLKRKIE SQWSDVLSFR ATYNSNDGAG ILEVEVLYNN
101: KITIGQWTHT RVYPDDIKAK FYFAKKRIIW EILDDVETGT QVERLKRKIE SQWSDVLSFR ATYNSNDGAG ILEVEVLYNN
001: MSMKRSREES QGGGNHNRFV DEGPRLNLPL TKTPELINKI ESYLKVHYTC PHQQTENSSK TSTLPKSPEK LKAMNFPIST IKIGDCVFVA KNPDDIVAKF
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QVRDLKERKK IITLIGIGGV GEGEGNFSMA NGGWQRNSYS
301: HVNSLNYNTD NGLLGMQAIP PSSQVANEHY NNTQNDYTGS QFGYRMNQDE IQKMQRIGKI LESQAYAVPD TQTKLTSSGM NNGPMYPPAG SYLESRLLEE
401: WYEHTRRFQQ
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QVRDLKERKK IITLIGIGGV GEGEGNFSMA NGGWQRNSYS
301: HVNSLNYNTD NGLLGMQAIP PSSQVANEHY NNTQNDYTGS QFGYRMNQDE IQKMQRIGKI LESQAYAVPD TQTKLTSSGM NNGPMYPPAG SYLESRLLEE
401: WYEHTRRFQQ
Arabidopsis Description
F10A16.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9L9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.