Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g100440.1.1 | Tomato | nucleus | 54.48 | 61.92 |
CDY25203 | Canola | cytosol | 13.2 | 32.37 |
Bra018890.1-P | Field mustard | nucleus | 13.37 | 32.11 |
CDY22822 | Canola | nucleus | 13.37 | 32.11 |
KRH33824 | Soybean | nucleus | 15.4 | 32.04 |
KRG90540 | Soybean | nucleus | 14.89 | 31.54 |
KRH30889 | Soybean | cytosol | 12.35 | 29.67 |
AT1G54300.1 | Thale cress | cytosol, nucleus, vacuole | 14.21 | 26.75 |
PGSC0003DMT400074432 | Potato | nucleus | 21.66 | 25.25 |
CDY05199 | Canola | nucleus | 17.09 | 25.19 |
PGSC0003DMT400029158 | Potato | cytosol | 22.67 | 25.14 |
GSMUA_Achr11P... | Banana | cytosol | 14.21 | 24.85 |
AT3G05770.1 | Thale cress | nucleus | 17.09 | 24.63 |
PGSC0003DMT400036859 | Potato | cytosol | 21.15 | 24.18 |
Bra001166.1-P | Field mustard | mitochondrion | 7.28 | 23.89 |
CDX74132 | Canola | cytosol | 14.72 | 21.7 |
CDY14664 | Canola | cytosol | 14.55 | 21.18 |
Bra039411.1-P | Field mustard | plastid | 18.1 | 20.94 |
VIT_14s0060g01240.t01 | Wine grape | cytosol | 21.83 | 20.71 |
CDY27740 | Canola | plastid | 17.77 | 20.59 |
Bra001165.1-P | Field mustard | mitochondrion | 4.74 | 12.17 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400007166 | EnsemblPlantsGene:PGSC0003DMG400002772 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF5 | PGSC:PGSC0003DMG400002772 | SEG:seg |
UniParc:UPI0002966180 | UniProt:M0ZSK8 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002772]
Coordinates
chr1:-:78117446..78120992
Molecular Weight (calculated)
66703.8 Da
IEP (calculated)
4.944
GRAVY (calculated)
-0.833
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIGDDHEGL YDLDHQRLYG VDHQSSESHQ SSESHQSSES HQSSESMNTE SDDVNAQLKS RRMSSESEED GDDHEGLYDL DHQRLYGVDH QSSESHQSSE
101: SMNTESDDVN AQLKSRRMSS ESEEDGLSKK FRTFPEFNSN PEVQDTELIG LTLSKTPSFV NLLESKLSQV KMKNNGSTRR VGRPSKSSRN MEDFAIVSER
201: LKAANFPAIK LSIGVWERVS KHEGDLIAKC YYAKRKLVWE LLDGPLKSKI EIQWSDIIAI RAIMPPGEQP GVLELELKEP PTFHRETNPQ PRKHTLWQQT
301: SDFTGGQAPI HRRHYVRFAP GVLDRHYEKL LRCDARLNEL SKKPFPSQIC PFFEQPDYNN DQVSDFSIGN DYGSQLLLNY PFHHLPSSSS TALLPNVREP
401: LRQFSSSYPV AGESISGIWG GQGSNNLVNV AMGNQAIGML PGGSTPDQQA DWITTTQDHQ AMYQQNDSIG NGQVDHTMLN NLKNYLLEEN QVTSYNEPAF
501: PYSLPEHHEN RSLVAATGDV HGLDSSYQMV NNNYAENVVP NYEMAYMQPN ANWMFPQQAN DQFSTNYATV SGGYPTQDVN QEAQSVWKTT N
101: SMNTESDDVN AQLKSRRMSS ESEEDGLSKK FRTFPEFNSN PEVQDTELIG LTLSKTPSFV NLLESKLSQV KMKNNGSTRR VGRPSKSSRN MEDFAIVSER
201: LKAANFPAIK LSIGVWERVS KHEGDLIAKC YYAKRKLVWE LLDGPLKSKI EIQWSDIIAI RAIMPPGEQP GVLELELKEP PTFHRETNPQ PRKHTLWQQT
301: SDFTGGQAPI HRRHYVRFAP GVLDRHYEKL LRCDARLNEL SKKPFPSQIC PFFEQPDYNN DQVSDFSIGN DYGSQLLLNY PFHHLPSSSS TALLPNVREP
401: LRQFSSSYPV AGESISGIWG GQGSNNLVNV AMGNQAIGML PGGSTPDQQA DWITTTQDHQ AMYQQNDSIG NGQVDHTMLN NLKNYLLEEN QVTSYNEPAF
501: PYSLPEHHEN RSLVAATGDV HGLDSSYQMV NNNYAENVVP NYEMAYMQPN ANWMFPQQAN DQFSTNYATV SGGYPTQDVN QEAQSVWKTT N
001: MSMKRSREES QGGGNHNRFV DEGPRLNLPL TKTPELINKI ESYLKVHYTC PHQQTENSSK TSTLPKSPEK LKAMNFPIST IKIGDCVFVA KNPDDIVAKF
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QGIGGVGEGE GNFSMANGGW QRNSYSHVNS LNYNTDNGLL
301: GMQAIPPSSQ VANEHYNNTQ NDYTGSQFGY RMNQDEIQKM QRIGKILESQ AYAVPDTQTK LTSSGMNNGP MYPPAGSYLE SRLLEEWYEH TRRFQQ
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QGIGGVGEGE GNFSMANGGW QRNSYSHVNS LNYNTDNGLL
301: GMQAIPPSSQ VANEHYNNTQ NDYTGSQFGY RMNQDEIQKM QRIGKILESQ AYAVPDTQTK LTSSGMNNGP MYPPAGSYLE SRLLEEWYEH TRRFQQ
Arabidopsis Description
F10A16.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9L9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.