Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g117680.2.1 | Tomato | cytosol | 86.85 | 84.08 |
| PGSC0003DMT400074432 | Potato | nucleus | 57.83 | 58.97 |
| HORVU0Hr1G040420.1 | Barley | cytosol | 18.76 | 56.73 |
| PGSC0003DMT400029158 | Potato | cytosol | 53.0 | 51.41 |
| Os06t0186600-02 | Rice | cytosol | 38.1 | 50.51 |
| VIT_09s0018g01680.t01 | Wine grape | cytosol | 51.45 | 50.09 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 43.71 | 47.68 |
| KXG19496 | Sorghum | nucleus | 49.32 | 47.57 |
| Os02t0793800-00 | Rice | cytosol | 26.5 | 47.24 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 46.81 | 46.81 |
| GSMUA_Achr9P22760_001 | Banana | nucleus | 47.97 | 46.62 |
| Zm00001d045084_P002 | Maize | cytosol | 48.16 | 46.28 |
| KRH44588 | Soybean | cytosol | 53.97 | 46.19 |
| Zm00001d037085_P005 | Maize | nucleus | 47.97 | 46.01 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 46.81 | 45.75 |
| KRH47309 | Soybean | nucleus | 52.61 | 45.41 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 46.42 | 45.03 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 46.03 | 44.91 |
| GSMUA_Achr4P05930_001 | Banana | cytosol | 46.42 | 44.86 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 46.23 | 44.84 |
| KXG31260 | Sorghum | cytosol | 42.17 | 43.69 |
| Zm00001d052047_P001 | Maize | nucleus | 39.85 | 42.21 |
| GSMUA_Achr4P12730_001 | Banana | mitochondrion | 47.2 | 41.85 |
| KRH28821 | Soybean | peroxisome | 33.85 | 40.98 |
| GSMUA_Achr4P11470_001 | Banana | plasma membrane | 43.13 | 39.54 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 34.24 | 36.72 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 33.66 | 36.02 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 32.88 | 33.73 |
| PGSC0003DMT400007166 | Potato | nucleus | 24.18 | 21.15 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400036859 | EnsemblPlantsGene:PGSC0003DMG400014214 | PANTHER:PTHR33494 | PANTHER:PTHR33494:SF1 | PGSC:PGSC0003DMG400014214 | SEG:seg |
| UniParc:UPI000296D219 | UniProt:M1B4D2 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014214]
Coordinates
chr3:-:57347909..57351718
Molecular Weight (calculated)
57807.0 Da
IEP (calculated)
5.283
GRAVY (calculated)
-0.632
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESPELQWH KGKNAAVKLE FEDALDEAYG PLNKRSKLSS SSLQQLVVGA DGFPVAPSQY NPLDEPSPLG LRLRKSPSLL DLIQMKLSQG NNAKVGNQGK
101: EQKGNSGTIE KLKASNFPAT VLRIGSWEYK SRYEGDLVAK CYFAKHKLVW EVLDGGLKNK IEIQWSDIMG LKANYPDDGP GTLDVVLSRQ PLFFRETNPQ
201: PRKHTLWQAT SDFTGGQASM QKRHYLQIPQ GLLGKHFEKL IQCDPRLNFL SQQPEITLDS PHFESRISVF EDPNVSESEF NLNNERSPPF LNLHGAASPS
301: GAHCSSSNGE QDFFVSRRLE NIRPETPSPS SVMDTREIQD VSRDMEQLKG LGNLDQIRVP GLHPSMSMKD LVSHFEQRFS EQGTSEVICL SSDERQSLEI
401: LEEISRCLFS DTQNMPASDE KSLMTRVNSL CCLLQKDPAT AHKSENYDDV AVGGKRTDEL ISFFPGDPST SEDKSNDPAP SMSRKDSIGD LLLNLPRIAS
501: LPHFLFNIYE DSDHPAR
101: EQKGNSGTIE KLKASNFPAT VLRIGSWEYK SRYEGDLVAK CYFAKHKLVW EVLDGGLKNK IEIQWSDIMG LKANYPDDGP GTLDVVLSRQ PLFFRETNPQ
201: PRKHTLWQAT SDFTGGQASM QKRHYLQIPQ GLLGKHFEKL IQCDPRLNFL SQQPEITLDS PHFESRISVF EDPNVSESEF NLNNERSPPF LNLHGAASPS
301: GAHCSSSNGE QDFFVSRRLE NIRPETPSPS SVMDTREIQD VSRDMEQLKG LGNLDQIRVP GLHPSMSMKD LVSHFEQRFS EQGTSEVICL SSDERQSLEI
401: LEEISRCLFS DTQNMPASDE KSLMTRVNSL CCLLQKDPAT AHKSENYDDV AVGGKRTDEL ISFFPGDPST SEDKSNDPAP SMSRKDSIGD LLLNLPRIAS
501: LPHFLFNIYE DSDHPAR
001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.