Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G040420.1 | Barley | cytosol | 18.46 | 57.31 |
| Solyc03g117680.2.1 | Tomato | cytosol | 54.43 | 54.12 |
| VIT_11s0037g00810.t01 | Wine grape | cytosol | 54.24 | 52.08 |
| PGSC0003DMT400036859 | Potato | cytosol | 50.09 | 51.45 |
| Os06t0186600-02 | Rice | cytosol | 36.72 | 50.0 |
| Os02t0793800-00 | Rice | cytosol | 26.74 | 48.97 |
| HORVU3Hr1G034290.1 | Barley | cytosol | 43.5 | 48.73 |
| PGSC0003DMT400074432 | Potato | nucleus | 45.01 | 47.14 |
| GSMUA_Achr5P04640_001 | Banana | nucleus | 44.63 | 45.84 |
| Zm00001d037085_P005 | Maize | nucleus | 46.52 | 45.83 |
| Zm00001d045084_P002 | Maize | cytosol | 46.33 | 45.72 |
| GSMUA_Achr9P22760_001 | Banana | nucleus | 45.76 | 45.68 |
| KXG19496 | Sorghum | nucleus | 45.95 | 45.52 |
| KRH44588 | Soybean | cytosol | 51.6 | 45.36 |
| Solyc06g068540.2.1 | Tomato | cytosol | 45.01 | 45.35 |
| KRH47309 | Soybean | nucleus | 51.04 | 45.24 |
| GSMUA_Achr4P05930_001 | Banana | cytosol | 45.01 | 44.67 |
| HORVU7Hr1G031130.2 | Barley | nucleus | 44.26 | 44.42 |
| TraesCS7B01G055300.1 | Wheat | cytosol | 43.88 | 43.96 |
| TraesCS7A01G151300.1 | Wheat | nucleus | 43.88 | 43.71 |
| TraesCS7D01G153200.1 | Wheat | nucleus | 43.69 | 43.53 |
| KXG31260 | Sorghum | cytosol | 39.74 | 42.28 |
| GSMUA_Achr4P12730_001 | Banana | mitochondrion | 45.57 | 41.51 |
| KRH28821 | Soybean | peroxisome | 33.33 | 41.45 |
| Zm00001d052047_P001 | Maize | nucleus | 36.91 | 40.16 |
| GSMUA_Achr4P11470_001 | Banana | plasma membrane | 41.24 | 38.83 |
| TraesCS6A01G354900.1 | Wheat | mitochondrion | 30.7 | 33.75 |
| TraesCS6B01G387700.1 | Wheat | mitochondrion | 29.57 | 32.57 |
| TraesCS6D01G337100.2 | Wheat | mitochondrion | 30.32 | 31.94 |
| VIT_14s0060g01240.t01 | Wine grape | cytosol | 25.8 | 21.99 |
Protein Annotations
| ArrayExpress:VIT_09s0018g01680 | EMBL:FN595513 | EnsemblPlants:VIT_09s0018g01680.t01 | EnsemblPlantsGene:VIT_09s0018g01680 | EntrezGene:100262159 | PANTHER:PTHR33494 |
| PANTHER:PTHR33494:SF1 | ProteinID:CCB49721 | ProteinID:CCB49721.1 | RefSeq:XP_010655140.1 | TIGR:TC54871 | unigene:Vvi.10112 |
| UniParc:UPI0002109881 | UniProt:F6HBY8 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr9:+:18991810..19000439
Molecular Weight (calculated)
58438.2 Da
IEP (calculated)
5.150
GRAVY (calculated)
-0.450
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEVMSCGGT SAEYGKRCRK MVPVKSEVED WDEPGLKQAQ KRLKLYSSQG LNQETGALHI PPLQYNLLDE PSPLGLQLKK SPSFLDLIQM RLTQGNGPKL
101: GSVGKKVTKG TPVTSASEKL KASNFAASIL RIGKWEYVSR YEGDLVAKCY FAKHKLVWEI LDGSLKNKIE IQWSDIIALK ANCPSEGPGT LDVVLARQPL
201: FFRETPPQPR KHTLWQTTAD FTGGQASLYR QHYLQCPQGL LGKHFEKLIQ CDPRLNFLSK QPEIVLDFPY FGDTDSVLED PDESKSHDFG LKREEDSSFS
301: GLQDAPSRGQ LSSSKIDPQD PVGGTTEIFF QNTLSPSSVM DTHVIEENGS IGTEGPKWLN NLCQIKVPGL HSSMSMSDLV SHIGHCLSEQ TSSCNPIFPS
401: DEPLNQDILE QITQYMFNDA QLSSASDEQS IMSRVNSLCC LLQNKPAAVQ NFQVKSENGT DTAGDGSIGE LNPIAASCES KTAGDFPTPN DETNDVSSCK
501: QPPAMSRKDS VGELLVNLPR IASLPQFLFN M
101: GSVGKKVTKG TPVTSASEKL KASNFAASIL RIGKWEYVSR YEGDLVAKCY FAKHKLVWEI LDGSLKNKIE IQWSDIIALK ANCPSEGPGT LDVVLARQPL
201: FFRETPPQPR KHTLWQTTAD FTGGQASLYR QHYLQCPQGL LGKHFEKLIQ CDPRLNFLSK QPEIVLDFPY FGDTDSVLED PDESKSHDFG LKREEDSSFS
301: GLQDAPSRGQ LSSSKIDPQD PVGGTTEIFF QNTLSPSSVM DTHVIEENGS IGTEGPKWLN NLCQIKVPGL HSSMSMSDLV SHIGHCLSEQ TSSCNPIFPS
401: DEPLNQDILE QITQYMFNDA QLSSASDEQS IMSRVNSLCC LLQNKPAAVQ NFQVKSENGT DTAGDGSIGE LNPIAASCES KTAGDFPTPN DETNDVSSCK
501: QPPAMSRKDS VGELLVNLPR IASLPQFLFN M
001: MVEMRKSGGL RPESESAARC RDELPVKLEI AEDDLEEEHG PLNKRSRLWS PGTSSSTMAP AKYNPLDEPS PLGLSLKKSP SLLELIQMKI THCGDPKAAE
101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP
201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES
301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL
401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL
501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR
101: TLKAGALGSG LKRESKTIAA AASVGPTLAP GSIEKLKASN FPASLLKIGQ WEYKSRYEGD LVAKCYFAKH KLVWEVLEQG LKSKIEIQWS DIMALKANCP
201: EDGPGTLTLV LARQPLFFRE TNPQPRKHTL WQATSDFTDG QASMNRQHFL QCAQGIMNKH FEKLVQCDHR LFHLSRQPEI AIDSPYFDAR QSIFEDPSES
301: KGHPFGNLNL STGPSISGTQ NLASPVGAQS SSEHMYLSHE APSPSSVIDA RANEGIGGSE AVNSRNRTDC GQIEAPGIHQ SMSLSDFLAV LCDTKNTTDL
401: NLADDVDGLH QSMSVSDFVA YLSDSRNITD SDQIKVPGLH QSMSVSDFVG LLSDSAGGSH PEHMEKFEIM KQQLLSDNIQ FEAPDEKSLM PRVNSLFNLL
501: YKDPNVAANS QLNTEMSVGL KSEPKGIVSD NNNNNNNNNR VLDTASSSKP QGMLRKDSFS DLLLHLPRIT SLPKFLSNIS EEDGDAYNR
Arabidopsis Description
ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9SUG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.