Factsheet for GSMUA_Achr11P05160_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90540	Soybean	nucleus	19.82	24.01
KRH33824	Soybean	nucleus	18.93	22.54
Bra018890.1-P	Field mustard	nucleus	15.98	21.95
CDY22822	Canola	nucleus	15.98	21.95
CDY25203	Canola	cytosol	14.79	20.75
AT1G54300.1	Thale cress	cytosol, nucleus, vacuole	18.64	20.06
Bra001166.1-P	Field mustard	mitochondrion	10.36	19.44
KRH30889	Soybean	cytosol	13.91	19.11
CDY14664	Canola	cytosol	21.6	17.98
CDX74132	Canola	cytosol	19.82	16.71
AT3G05770.1	Thale cress	nucleus	20.12	16.59
GSMUA_Achr5P04640_001	Banana	nucleus	24.85	16.25
VIT_14s0060g01240.t01	Wine grape	cytosol	27.81	15.09
GSMUA_Achr9P22760_001	Banana	nucleus	23.37	14.85
Solyc01g100440.1.1	Tomato	nucleus	22.78	14.81
GSMUA_Achr4P05930_001	Banana	cytosol	23.37	14.77
Bra001165.1-P	Field mustard	mitochondrion	9.76	14.35
CDY05199	Canola	nucleus	16.86	14.21
PGSC0003DMT400007166	Potato	nucleus	24.85	14.21
GSMUA_Achr4P12730_001	Banana	mitochondrion	22.78	13.21
GSMUA_Achr4P11470_001	Banana	plasma membrane	21.89	13.12
CDY27740	Canola	plastid	18.64	12.35
Bra039411.1-P	Field mustard	plastid	18.64	12.33

Protein Annotations

EnsemblPlants:GSMUA_Achr11P05160_001	EnsemblPlants:GSMUA_Achr11T05160_001	EnsemblPlantsGene:GSMUA_Achr11G05160_001	PANTHER:PTHR33494	PANTHER:PTHR33494:SF5	SEG:seg
UniParc:UPI0002960D8B	UniProt:M0RPJ6	MapMan:35.2	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G05160_001]

Coordinates

chr11:+:3863498..3866203

Molecular Weight (calculated)

38419.5 Da

IEP (calculated)

8.037

GRAVY (calculated)

-0.566

Length

338 amino acids

Sequence
(BLAST)

001: MKLQRKINLS SELTQNNSLE EQNTGNDKHN AEPRADKLRI INVPVLMLKI GSWQCVSVGE GDIAAKCFYG KKKFVWEMLR CGSKKKFEIQ WSDISAIRAH
101: FADKQPDILE VELKKPPQLF EQVSSDPRRH PMWQPIPDFT EDQSRLYRRH HLEFREGSFR KPYDKLLLEN KHLFRLSHNL FENDMSPLFR VVRSGIQYSS
201: TIPQLLHMFN QQTNNLYHSF TDHFGNQGTT DLSTWYVGNS GYMAQSFGAN LLTGQPVPPF RLADENKPTN LGCTSESVDA YLPTGFLPPT GLADDKWPSS
301: DIAFLAAAAA DHSRVVNHIP NMDNRASSSA NLVINPGT

Best Arabidopsis Sequence Match ( AT2G24100.1 )
(BLAST)

001: MVEMMRSENH LRQASKHRNN NFPVKLEIIE DSLEEEHAPL NKRSKLWSNG TSVSKFSLLE EPSPLGLSLK KSPSFQELIE MKLSQSGDDS NSVKKESFGF
101: GGVGTVEKLK ASNFPATILR IGQWEYKSRY EGDLVAKCYF AKHKLVWEVL EQGLKSKIEI QWSDIMALKA NLPEDEPGTL TIVLARRPLF FRETNPQPRK
201: HTLWQATSDF TDGQASMNRQ HFLQCPPGIM NKHFEKLVQC DHRLFCLSRQ PEINLAAPFF DSRLSIFEDP SVSGSHNIAS PVGAQSSSEH VSLSHDALSP
301: SSVMDARAIE GVGGSIDSRN TNGWSQIKMP GLHQSISMND FLTFLSDQAC ENNQEFEEMK QLLLSDNTQT DPSDEKSVMS KVNSFCNLLQ SAANSQLNIE
401: TADTERVVGV DNNRHMPEGG KRVVDPASSS KPLQGMSRKD SFSDLLVHLP RITSLPKFLF NISEED

Arabidopsis Description

ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9ZUI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.