Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22822 | Canola | nucleus | 100.0 | 100.0 |
| Bra001166.1-P | Field mustard | mitochondrion | 23.98 | 32.78 |
| AT1G54300.1 | Thale cress | cytosol, nucleus, vacuole | 37.8 | 29.62 |
| AT3G05770.1 | Thale cress | nucleus | 43.09 | 25.85 |
| KRG90540 | Soybean | nucleus | 26.83 | 23.66 |
| KRH33824 | Soybean | nucleus | 26.02 | 22.54 |
| KRH30889 | Soybean | cytosol | 21.14 | 21.14 |
| Bra039411.1-P | Field mustard | plastid | 43.9 | 21.14 |
| Bra039229.1-P | Field mustard | nucleus | 33.33 | 19.11 |
| Bra011214.1-P | Field mustard | cytosol | 12.2 | 17.65 |
| Bra001165.1-P | Field mustard | mitochondrion | 15.45 | 16.52 |
| GSMUA_Achr11P... | Banana | cytosol | 21.95 | 15.98 |
| Bra024044.1-P | Field mustard | nucleus | 35.37 | 15.32 |
| Bra011221.1-P | Field mustard | nucleus | 34.96 | 15.11 |
| Solyc01g100440.1.1 | Tomato | nucleus | 31.71 | 15.0 |
| Bra010274.1-P | Field mustard | cytosol | 32.93 | 14.57 |
| PGSC0003DMT400007166 | Potato | nucleus | 32.11 | 13.37 |
| VIT_14s0060g01240.t01 | Wine grape | cytosol | 29.67 | 11.72 |
Protein Annotations
Description
AT3G05770 (E=4e-046) | unknown protein
Coordinates
chrA06:-:1407429..1408670
Molecular Weight (calculated)
28475.7 Da
IEP (calculated)
6.804
GRAVY (calculated)
-0.757
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSQEELES SNNGGSSPNK IPGSVDEEVE NGPLNLALTI TPEFLKQIES LLQQQEQDSN STPPGKTKPM SFPISKITIG EWTLDAVYEQ DLKAKIYFAR
101: KKIMWECVED VSTTTGMNRK IEMQWGDVLS LKPWYHPHDQ TGILKVELRK PPTFFIETNP QARKHTQWQQ LYQDFTRNHS ASRNRIHTLH FAPGVLQKNM
201: EKLVSGDRFW SELVKVHFPT LEHLYFYDIG YGNSMNNMHD GNRVPR
101: KKIMWECVED VSTTTGMNRK IEMQWGDVLS LKPWYHPHDQ TGILKVELRK PPTFFIETNP QARKHTQWQQ LYQDFTRNHS ASRNRIHTLH FAPGVLQKNM
201: EKLVSGDRFW SELVKVHFPT LEHLYFYDIG YGNSMNNMHD GNRVPR
001: MSMKRSREES QGGGNHNRFV DEGPRLNLPL TKTPELINKI ESYLKVHYTC PHQQTENSSK TSTLPKSPEK LKAMNFPIST IKIGDCVFVA KNPDDIVAKF
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QVRDLKERKK IITLIGIGGV GEGEGNFSMA NGGWQRNSYS
301: HVNSLNYNTD NGLLGMQAIP PSSQVANEHY NNTQNDYTGS QFGYRMNQDE IQKMQRIGKI LESQAYAVPD TQTKLTSSGM NNGPMYPPAG SYLESRLLEE
401: WYEHTRRFQQ
101: YFAKKKLLWE FLFGEPVANM PRLKSKIEIQ WNDVSSFEES INSRDETGIL KIELKKRPTF FTETNPQAGK HTQWKQLDYD FTGDQASYYR RHTLHFPPGV
201: LQKNLEKLLT DSFWSKLYKV PFPVHESLYF DIGFENNNSS NGHSKTVGFN VNNGLQHDFS QVRDLKERKK IITLIGIGGV GEGEGNFSMA NGGWQRNSYS
301: HVNSLNYNTD NGLLGMQAIP PSSQVANEHY NNTQNDYTGS QFGYRMNQDE IQKMQRIGKI LESQAYAVPD TQTKLTSSGM NNGPMYPPAG SYLESRLLEE
401: WYEHTRRFQQ
Arabidopsis Description
F10A16.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9L9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.