Factsheet for GSMUA_Achr11P09100_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P25720_001
GSMUA_Achr4P05930_001
GSMUA_Achr4P11470_001
GSMUA_Achr4P12730_001
GSMUA_Achr5P04640_001
GSMUA_Achr7P03500_001
GSMUA_Achr9P22760_001
GSMUA_Achr9P30650_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22360.1	GSMUA_Achr11P...	AT1G16500.1	21798944
AT5G22360.1	GSMUA_Achr1P25720_001	AT1G16500.1	21798944
AT5G22360.1	GSMUA_Achr7P03500_001	AT1G16500.1	21798944
AT5G22360.1	GSMUA_Achr9P30650_001	AT1G16500.1	21798944
AT5G22360.1	GSMUA_AchrUn_...	AT1G16500.1	21798944
AT5G22360.1	GSMUA_Achr10P...	AT1G22920.1	21798944
AT5G22360.1	GSMUA_Achr4P05930_001	AT2G24100.1	21798944
AT5G22360.1	GSMUA_Achr4P11470_001	AT2G24100.1	21798944
AT5G22360.1	GSMUA_Achr4P12730_001	AT2G24100.1	21798944
AT5G22360.1	GSMUA_Achr5P04640_001	AT2G24100.1	21798944
AT5G22360.1	GSMUA_Achr9P22760_001	AT2G24100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	95.41	95.41
Zm00001d052756_P001	Maize	endoplasmic reticulum	78.44	88.6
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	86.7	85.14
HORVU7Hr1G078500.1	Barley	plasma membrane	85.78	84.23
TraesCS7D01G324800.1	Wheat	plasma membrane	85.32	83.78
TraesCS7B01G228700.1	Wheat	plasma membrane	85.32	83.78
TraesCS7A01G328000.1	Wheat	plasma membrane	85.32	83.78
KRH30399	Soybean	endoplasmic reticulum	83.94	83.18
KRH25265	Soybean	plasma membrane	83.94	83.18
Os10t0154000-01	Rice	plasma membrane	85.78	82.74
VIT_06s0080g00800.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.49	82.73
AT5G22360.1	Thale cress	plasma membrane	83.03	81.9
Bra020187.1-P	Field mustard	endoplasmic reticulum	83.03	81.9
CDY09133	Canola	endoplasmic reticulum	83.03	81.9
CDX88799	Canola	plasma membrane	82.11	81.0
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	81.65	80.54
CDX70999	Canola	endoplasmic reticulum	81.65	80.54
PGSC0003DMT400015063	Potato	plastid	76.61	73.25
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	84.4	70.5
GSMUA_Achr6P35140_001	Banana	plasma membrane	55.96	55.45
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	55.05	54.55
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	38.07	37.9
GSMUA_Achr7P01760_001	Banana	plasma membrane	37.61	37.44
GSMUA_Achr2P17740_001	Banana	cytosol	37.16	36.99
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	36.7	36.53
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	36.24	36.07
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	36.24	35.91
GSMUA_Achr9P11030_001	Banana	cytosol	35.78	35.62
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.7	33.61
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	30.73	30.45
GSMUA_Achr9P30970_001	Banana	cytosol	31.65	30.26

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr11G09100_001	EnsemblPlants:GSMUA_Achr11P09100_001	EnsemblPlants:GSMUA_Achr11T09100_001
InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	UniProt:M0RQP0	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF165	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI0002965460	SEG:seg	:	:	:	:

Description

Vesicle-associated membrane protein 714 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09100_001]

Coordinates

chr11:-:7032556..7037838

Molecular Weight (calculated)

24692.3 Da

IEP (calculated)

9.915

GRAVY (calculated)

0.104

Length

218 amino acids

Sequence
(BLAST)

001: MAILYAVVAR GTVVLAEFAA VTGNVGALAR RILEKLPPDS DSRLCFSQDR YIFHVLRSDG ITFLCMANET FGRRVPFQYL EDIHMRFMKN YGRVAHSALA
101: YAMNDEFSRV LHQQMEFFSS NPSADTLNRV RGEIHTIMVD NIDKILDRGD RISLLVDKTA TMQDSAFHFR KQSRRLRRAL WMKNAKLLAV LTVAIALLLY
201: VIIAACCGGI TLPSCRSR

Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S

Arabidopsis Description

VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.