Factsheet for Os10t0154000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0793800-00
Os03t0660700-01
Os04t0617700-01
Os04t0654700-02
Os06t0186600-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22360.1	Os03t0660700-01	AT1G16500.1	21798944
AT5G22360.1	Os04t0617700-01	AT1G16500.1	21798944
AT5G22360.1	Os04t0654700-02	AT1G22920.1	21798944
AT5G22360.1	Os02t0793800-00	AT2G24100.1	21798944
AT5G22360.1	Os06t0186600-02	AT2G24100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052756_P001	Maize	endoplasmic reticulum	80.53	94.3
TraesCS7B01G228700.1	Wheat	plasma membrane	91.15	92.79
TraesCS7A01G328000.1	Wheat	plasma membrane	91.15	92.79
EES13179	Sorghum	endoplasmic reticulum, plasma membrane	90.71	92.34
HORVU7Hr1G078500.1	Barley	plasma membrane	90.71	92.34
TraesCS7D01G324800.1	Wheat	plasma membrane	90.71	92.34
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	83.19	86.24
GSMUA_Achr11P...	Banana	endoplasmic reticulum	82.74	85.78
VIT_06s0080g00800.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.53	82.73
Bra020187.1-P	Field mustard	endoplasmic reticulum	79.65	81.45
CDY09133	Canola	endoplasmic reticulum	79.65	81.45
KRH25265	Soybean	plasma membrane	79.2	81.36
KRH30399	Soybean	endoplasmic reticulum	79.2	81.36
AT5G22360.1	Thale cress	plasma membrane	79.2	81.0
CDX88799	Canola	plasma membrane	79.2	81.0
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	78.76	80.54
CDX70999	Canola	endoplasmic reticulum	78.76	80.54
PGSC0003DMT400015063	Potato	plastid	74.34	73.68
Solyc06g074250.2.1	Tomato	endoplasmic reticulum, plasma membrane	80.53	69.73
Os06t0174400-01	Rice	plasma membrane	53.54	54.75
Os02t0803600-01	Rice	plasma membrane	50.88	50.88
Os07t0194000-01	Rice	plasma membrane	37.61	38.64
Os03t0803000-01	Rice	plasma membrane	36.28	37.27
Os12t0639800-00	Rice	plasma membrane	35.84	36.99
Os03t0165800-01	Rice	plasma membrane	36.28	36.77
Os08t0558600-01	Rice	extracellular	34.07	31.95
Os07t0249200-01	Rice	cytosol	32.74	29.84

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.5.1	Gene3D:3.30.450.50	EntrezGene:4348130	ProteinID:ABB46773.2	EMBL:AK060093
EMBL:AK065734	ProteinID:BAF26098.1	ProteinID:BAT09923.1	ProteinID:EEE50583.1	GO:GO:0000149	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0006887	GO:GO:0006906	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf
InterPro:Longin_dom	EnsemblPlantsGene:Os10g0154000	EnsemblPlants:Os10t0154000-01	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219
ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF165	UniProt:Q33B02
SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI00005E1BAA
RefSeq:XP_015614986.1	SEG:seg	:	:	:	:

Description

VESICLE-ASSOCIATED MEMBRANE PROTEIN 714Membrane-trafficking protein, Intracellular SNARE protein, Resistance to rice blast disease (Os10t0154000-01);Similar to vesicle-associated membrane protein 714. (Os10t0154000-02)

Coordinates

chr10:-:3358124..3360552

Molecular Weight (calculated)

25415.1 Da

IEP (calculated)

9.655

GRAVY (calculated)

0.130

Length

226 amino acids

Sequence
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VSGNAGAVAR RILEKLPPDA ESRLCFAQDR YIFHVLRSPP PAAADGLTFL CMANDTFGRR IPFLYLEDIQ MRFIKNYGRI
101: AHNALAYAMN DEFSRVLHQQ MEYFSSNPSA DTLNRLRGEV SEIHTVMVDN IEKILDRGER ISLLVDKTST MQDSAFHFRK QSRRLRRALW MKNAKLLAVL
201: TAVIVLLLYL IIAAFCGGLS LPSCRS

Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)

001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S

Arabidopsis Description

VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.