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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH25265 Soybean plasma membrane 90.45 90.45
KRH30399 Soybean endoplasmic reticulum 89.55 89.55
AT5G22360.1 Thale cress plasma membrane 89.09 88.69
Bra006623.1-P Field mustard endoplasmic reticulum, plasma membrane 86.82 86.43
CDX70999 Canola endoplasmic reticulum 86.82 86.43
CDX88799 Canola plasma membrane 86.82 86.43
Zm00001d052756_P001 Maize endoplasmic reticulum 75.45 86.01
Bra020187.1-P Field mustard endoplasmic reticulum 85.45 85.07
CDY09133 Canola endoplasmic reticulum 85.45 85.07
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 83.18 83.94
EES13179 Sorghum endoplasmic reticulum, plasma membrane 84.55 83.78
GSMUA_Achr11P... Banana endoplasmic reticulum 82.73 83.49
TraesCS7A01G328000.1 Wheat plasma membrane 83.64 82.88
TraesCS7B01G228700.1 Wheat plasma membrane 83.64 82.88
TraesCS7D01G324800.1 Wheat plasma membrane 83.64 82.88
HORVU7Hr1G078500.1 Barley plasma membrane 83.18 82.43
Os10t0154000-01 Rice plasma membrane 82.73 80.53
PGSC0003DMT400015063 Potato plastid 79.55 76.75
Solyc06g074250.2.1 Tomato endoplasmic reticulum, plasma membrane 89.55 75.48
VIT_04s0008g05650.t01 Wine grape extracellular 57.27 57.27
VIT_07s0005g05790.t01 Wine grape cytosol, vacuole 37.73 37.9
VIT_05s0136g00290.t01 Wine grape extracellular 35.91 35.91
VIT_01s0011g01660.t01 Wine grape endoplasmic reticulum 35.91 35.75
VIT_05s0020g01430.t01 Wine grape cytosol 33.18 33.03
VIT_13s0101g00410.t01 Wine grape endoplasmic reticulum, golgi 34.55 31.8
Protein Annotations
Gene3D:1.20.5.110EntrezGene:100241605wikigene:100241605MapMan:22.7.5.1Gene3D:3.30.450.50EMBL:AM436644
ProteinID:CAN64940ProteinID:CAN64940.1ProteinID:CBI28291ProteinID:CBI28291.3UniProt:D7TCR8EMBL:FN595757
GO:GO:0000149GO:GO:0003674GO:GO:0005484GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0006906
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0016192
GO:GO:0031201InterPro:IPR001388InterPro:IPR010908EntrezGene:LOC100241605wikigene:LOC100241605InterPro:Longin-like_dom_sf
InterPro:Longin_domPFAM:PF00957PFAM:PF13774PRINTS:PR00219ScanProsite:PS00417PFscan:PS50859
PFscan:PS50892PANTHER:PTHR21136PANTHER:PTHR21136:SF165SMART:SM01270SUPFAM:SSF58038SUPFAM:SSF64356
InterPro:SynaptobrevinTIGR:TC59944TIGR:TC69521TMHMM:TMhelixUniParc:UPI0001985B15ArrayExpress:VIT_06s0080g00800
EnsemblPlantsGene:VIT_06s0080g00800EnsemblPlants:VIT_06s0080g00800.t01unigene:Vvi.1477RefSeq:XP_002273961RefSeq:XP_002273961.1SEG:seg
Description
No Description!
Coordinates
chr6:+:20803183..20813051
Molecular Weight (calculated)
24900.6 Da
IEP (calculated)
9.238
GRAVY (calculated)
0.106
Length
220 amino acids
Sequence
(BLAST)
001: MAIVYALVAR GTVVLSEFSA VSGNTGAVAR RILEKLPAEA DSRLCFSQDR YIFHILRADG LAFLCMANDT FGRRIPFSYL EDIQMRFMKN YGKVAHYAPA
101: YAMNDEFSRV LHQQMEFFSS NPSADTLNRV RGEVGEIRTI MVENIEKILE RGDRIELLVD KTATMQDSSF HFKKQSKRLR RALWMKNAKL LALLTCLIVV
201: LLYIIIAACC GGITLPSCRS
Best Arabidopsis Sequence Match ( AT5G22360.1 )
(BLAST)
001: MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
101: AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
201: FLLYIIIASF CGGITLPSCR S
Arabidopsis Description
VAMP714Vesicle-associated membrane protein 714 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMR5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.