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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • nucleus 2
  • mitochondrion 1
  • cytosol 2
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:cytosol
 extracellular: 27664331
msms PMID: 27664331 doi
P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_17s0000g06860.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04750.1 VIT_17s0000g06860.t01 AT5G61210.1 23661365
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0005g05790.t01 Wine grape cytosol, vacuole 92.27 92.69
GSMUA_Achr8P15290_001 Banana cytosol, endoplasmic reticulum 91.82 92.24
Os07t0194000-01 Rice plasma membrane 91.82 91.82
GSMUA_Achr9P11030_001 Banana cytosol 91.36 91.78
GSMUA_Achr9P25440_001 Banana cytosol, vacuole 90.45 90.87
GSMUA_Achr4P22260_001 Banana cytosol, extracellular 90.45 90.87
Bra015345.1-P Field mustard endoplasmic reticulum 90.45 90.45
CDY18254 Canola endoplasmic reticulum 90.45 90.45
CDX89793 Canola endoplasmic reticulum 90.45 90.45
Zm00001d007767_P001 Maize extracellular 90.91 90.09
EER96027 Sorghum extracellular 90.91 90.09
Os03t0803000-01 Rice plasma membrane 90.0 90.0
GSMUA_Achr7P01760_001 Banana plasma membrane 89.55 89.95
OQU90815 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 89.55 89.55
AT1G04750.1 Thale cress endoplasmic reticulum, golgi 89.09 89.5
CDX86608 Canola endoplasmic reticulum 89.09 89.5
Bra005568.1-P Field mustard cytosol 89.09 89.09
CDY12188 Canola cytosol 89.09 89.09
CDY19450 Canola cytosol, extracellular 90.0 88.79
CDX84731 Canola cytosol 88.64 88.64
Bra022893.1-P Field mustard cytosol 88.64 88.64
GSMUA_Achr2P17740_001 Banana cytosol 88.18 88.58
CDY17139 Canola cytosol, extracellular 89.55 88.34
Bra005523.1-P Field mustard cytosol, extracellular 89.55 88.34
CDX84702 Canola endoplasmic reticulum 89.09 88.29
CDX79510 Canola endoplasmic reticulum 89.09 88.29
Bra022926.1-P Field mustard endoplasmic reticulum 89.09 88.29
Bra032493.1-P Field mustard cytosol 88.18 88.18
CDY15521 Canola endoplasmic reticulum 87.73 88.13
AT1G04760.2 Thale cress cytosol 87.73 87.73
CDY06150 Canola cytosol 87.73 87.73
CDY10053 Canola endoplasmic reticulum 87.27 87.27
Bra030588.1-P Field mustard endoplasmic reticulum 85.91 86.3
CDY19154 Canola cytosol 85.91 85.91
AT2G33120.2 Thale cress golgi 89.09 85.59
TraesCS5D01G459900.1 Wheat vacuole 86.36 85.59
TraesCS5B01G457700.1 Wheat vacuole 86.36 85.59
Bra021804.1-P Field mustard cytosol 85.45 85.45
HORVU5Hr1G107510.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 86.36 85.2
TraesCS5A01G449900.1 Wheat unclear 86.36 85.2
CDY48531 Canola cytosol 84.09 84.09
CDY59643 Canola extracellular 27.73 82.43
VIT_01s0011g01660.t01 Wine grape endoplasmic reticulum 81.82 81.45
CDX79466 Canola endoplasmic reticulum 63.64 79.55
CDY19156 Canola cytosol 51.36 78.47
Bra021828.1-P Field mustard endoplasmic reticulum, extracellular 77.73 78.08
CDY37751 Canola endoplasmic reticulum, extracellular, plasma membrane 77.27 77.63
CDY59642 Canola endoplasmic reticulum 62.73 77.53
Zm00001d019091_P002 Maize vacuole 90.45 76.25
Zm00001d013055_P002 Maize extracellular, plasma membrane 81.36 75.85
AT2G33110.1 Thale cress extracellular, golgi 72.73 73.73
CDX79465 Canola extracellular 28.18 72.09
CDY23768 Canola endoplasmic reticulum, extracellular, plasma membrane 53.64 70.66
GSMUA_Achr8P03260_001 Banana cytosol, mitochondrion, plasma membrane, plastid 70.45 70.45
VIT_05s0020g01430.t01 Wine grape cytosol 70.0 69.68
AT2G32670.1 Thale cress endoplasmic reticulum, golgi 88.18 68.07
CDY23767 Canola extracellular 30.45 62.62
VIT_13s0101g00410.t01 Wine grape endoplasmic reticulum, golgi 65.91 60.67
TraesCS3B01G193500.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.64 36.16
VIT_04s0008g05650.t01 Wine grape extracellular 35.91 35.91
VIT_06s0080g00800.t01 Wine grape endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.91 35.91
PGSC0003DMT400043452 Potato cytosol 52.27 31.17
Solyc12g098170.1.1 Tomato cytosol 16.36 11.8
Protein Annotations
Gene3D:1.20.5.110EntrezGene:100252972wikigene:100252972MapMan:13.4.2.3.4MapMan:22.7.5.1Gene3D:3.30.450.50
EMBL:AM469613ProteinID:CAN65946ProteinID:CAN65946.1ProteinID:CBI40837ProteinID:CBI40837.3ncoils:Coil
UniProt:D7UDM2EMBL:FN596762GO:GO:0000149GO:GO:0003674GO:GO:0005484GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810
GO:GO:0006887GO:GO:0006906GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016192GO:GO:0031201InterPro:IPR001388InterPro:IPR010908EntrezGene:LOC100252972
wikigene:LOC100252972InterPro:Longin-like_dom_sfInterPro:Longin_domPFAM:PF00957PFAM:PF13774PRINTS:PR00219
ScanProsite:PS00417PFscan:PS50859PFscan:PS50892PANTHER:PTHR21136PANTHER:PTHR21136:SF92SMART:SM01270
SUPFAM:SSF58038SUPFAM:SSF64356InterPro:SynaptobrevinTIGR:TC56706TMHMM:TMhelixUniParc:UPI00015CC4A7
ArrayExpress:VIT_05s0136g00290EnsemblPlantsGene:VIT_05s0136g00290EnsemblPlants:VIT_05s0136g00290.t01RefSeq:XP_002264270RefSeq:XP_002264270.1SEG:seg
Description
No Description!
Coordinates
chr5:+:13658793..13670156
Molecular Weight (calculated)
24780.4 Da
IEP (calculated)
9.186
GRAVY (calculated)
-0.086
Length
220 amino acids
Sequence
(BLAST)
001: MVGQQSLIYS FVARGTVILA EYTEFTGNFT SIAAQCLQKL PASNNKFTYN CDGHTFNYLV ENGFTYCVVA VESAGRQIPI AFLERVKDDF NKRYGGGKAA
101: TAVANGLNKE FGPKLKEHMQ YCVDHPEEIS KLAKVKAQVS EVKGVMMENI EKVLDRGEKI ELLVDKTENL RSQAQDFRQQ GTKMRRKMWM QNMKIKLIVL
201: GIIIALILII VLSICHGFKC
Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)
001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT
Arabidopsis Description
VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.