CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59643	Canola	extracellular	75.58	87.84
CDY23767	Canola	extracellular	62.79	50.47
CDX84731	Canola	cytosol	79.07	30.91
CDY12188	Canola	cytosol	77.91	30.45
AT1G04760.2	Thale cress	cytosol	75.58	29.55
CDY48531	Canola	cytosol	74.42	29.09
CDY19154	Canola	cytosol	74.42	29.09
VIT_05s0136g00290.t01	Wine grape	extracellular	72.09	28.18
CDX86608	Canola	endoplasmic reticulum	70.93	27.85
GSMUA_Achr7P01760_001	Banana	plasma membrane	70.93	27.85
CDY15521	Canola	endoplasmic reticulum	69.77	27.4
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	69.77	27.4
GSMUA_Achr9P11030_001	Banana	cytosol	69.77	27.4
CDX84702	Canola	endoplasmic reticulum	69.77	27.03
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	68.6	26.94
CDY19450	Canola	cytosol, extracellular	69.77	26.91
CDY17139	Canola	cytosol, extracellular	69.77	26.91
CDY06150	Canola	cytosol	68.6	26.82
CDY18254	Canola	endoplasmic reticulum	68.6	26.82
CDX89793	Canola	endoplasmic reticulum	68.6	26.82
Os07t0194000-01	Rice	plasma membrane	68.6	26.82
Zm00001d007767_P001	Maize	extracellular	68.6	26.58
EER96027	Sorghum	extracellular	68.6	26.58
CDX79510	Canola	endoplasmic reticulum	68.6	26.58
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	67.44	26.48
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	67.44	26.48
CDY10053	Canola	endoplasmic reticulum	67.44	26.36
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.44	26.36
Os03t0803000-01	Rice	plasma membrane	67.44	26.36
TraesCS5D01G459900.1	Wheat	vacuole	66.28	25.68
TraesCS5B01G457700.1	Wheat	vacuole	66.28	25.68
GSMUA_Achr2P17740_001	Banana	cytosol	65.12	25.57
TraesCS5A01G449900.1	Wheat	unclear	66.28	25.56
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.28	25.56
CDY22900	Canola	cytosol, plasma membrane, plastid	62.79	24.32
Zm00001d013055_P002	Maize	extracellular, plasma membrane	66.28	24.15
CDY44179	Canola	cytosol	61.63	23.87
AT2G32670.1	Thale cress	endoplasmic reticulum, golgi	75.58	22.81
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.14	22.73
Zm00001d019091_P002	Maize	vacuole	68.6	22.61
CDY07551	Canola	cytosol	52.33	18.75
CDX67594	Canola	cytosol	52.33	18.67
CDX76153	Canola	cytosol	52.33	18.59
CDX78228	Canola	cytosol, plasma membrane	51.16	18.33
CDX73490	Canola	plasma membrane	51.16	18.26
CDY13199	Canola	plasma membrane	34.88	15.08
CDX70999	Canola	endoplasmic reticulum	32.56	12.67
CDX88799	Canola	plasma membrane	31.4	12.22
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.63	11.83
CDY09133	Canola	endoplasmic reticulum	30.23	11.76
CDY61387	Canola	endoplasmic reticulum, plasma membrane	27.91	10.96
CDX75224	Canola	endoplasmic reticulum, plasma membrane	27.91	10.91
CDX68821	Canola	endoplasmic reticulum, plasma membrane	26.74	10.45
CDX69781	Canola	plasma membrane	26.74	10.41
CDX97084	Canola	plasma membrane	26.74	10.41
CDY48527	Canola	cytosol	5.81	6.94
PGSC0003DMT400043452	Potato	cytosol	27.91	6.5
Solyc12g098170.1.1	Tomato	cytosol	22.09	6.23
CDY22757	Canola	cytosol	13.95	5.94
CDX79466	Canola	endoplasmic reticulum	11.63	5.68
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.47	5.39
CDY59642	Canola	endoplasmic reticulum	8.14	3.93
CDY19156	Canola	cytosol	4.65	2.78

Protein Annotations

EnsemblPlants:CDX79465	EnsemblPlantsGene:GSBRNA2T00132206001	Gene3D:3.30.450.50	GO:A0A078CRK4	InterPro:IPR010908	InterPro:Longin-like_dom_sf
InterPro:Longin_dom	PANTHER:PTHR21136	PANTHER:PTHR21136:SF120	PFAM:PF13774	PFscan:PS50859	ProteinID:CDX79465
ProteinID:CDX79465.1	SUPFAM:SSF64356	UniParc:UPI0004EDC5AB	MapMan:22.7.5.1	:	:

Description

BnaC03g18010D

Coordinates

chrLK031818:+:221852..222187

Molecular Weight (calculated)

9761.6 Da

IEP (calculated)

8.311

GRAVY (calculated)

0.048

Length

86 amino acids

Sequence
(BLAST)

1: MGQQNLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLVV NGFSPLFSTY VRVSCQCMSE ISFRLY

Best Arabidopsis Sequence Match ( AT1G04760.1 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.