Factsheet for Zm00001d007767_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96027	Sorghum	extracellular	100.0	100.0
Os07t0194000-01	Rice	plasma membrane	97.75	98.64
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	91.89	93.15
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	90.99	92.24
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	90.99	92.24
GSMUA_Achr9P11030_001	Banana	cytosol	90.54	91.78
VIT_05s0136g00290.t01	Wine grape	extracellular	90.09	90.91
GSMUA_Achr7P01760_001	Banana	plasma membrane	89.19	90.41
Bra022893.1-P	Field mustard	cytosol	86.94	87.73
Bra015345.1-P	Field mustard	endoplasmic reticulum	86.94	87.73
CDY18254	Canola	endoplasmic reticulum	86.94	87.73
CDX84731	Canola	cytosol	86.94	87.73
CDX89793	Canola	endoplasmic reticulum	86.94	87.73
CDX86608	Canola	endoplasmic reticulum	86.49	87.67
Bra005568.1-P	Field mustard	cytosol	86.49	87.27
CDY12188	Canola	cytosol	86.49	87.27
CDY15521	Canola	endoplasmic reticulum	86.04	87.21
Bra032493.1-P	Field mustard	cytosol	85.14	85.91
CDY06150	Canola	cytosol	84.68	85.45
CDY19154	Canola	cytosol	84.68	85.45
Bra030588.1-P	Field mustard	endoplasmic reticulum	84.23	85.39
Bra005523.1-P	Field mustard	cytosol, extracellular	85.59	85.2
CDY17139	Canola	cytosol, extracellular	85.59	85.2
CDY10053	Canola	endoplasmic reticulum	84.23	85.0
Bra021804.1-P	Field mustard	cytosol	84.23	85.0
CDY19450	Canola	cytosol, extracellular	85.14	84.75
CDX79510	Canola	endoplasmic reticulum	84.68	84.68
Bra022926.1-P	Field mustard	endoplasmic reticulum	84.68	84.68
CDX84702	Canola	endoplasmic reticulum	84.68	84.68
Zm00001d019091_P002	Maize	vacuole	98.65	83.91
CDY48531	Canola	cytosol	82.88	83.64
Zm00001d013055_P002	Maize	extracellular, plasma membrane	87.84	82.63
CDX79466	Canola	endoplasmic reticulum	63.96	80.68
CDY19156	Canola	cytosol	50.9	78.47
CDY59643	Canola	extracellular	26.13	78.38
CDY59642	Canola	endoplasmic reticulum	62.16	77.53
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	75.23	76.26
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	74.77	75.8
Zm00001d027808_P001	Maize	cytosol, mitochondrion	72.97	73.3
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	70.72	71.36
Zm00001d053132_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.79	70.9
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.7	70.06
CDX79465	Canola	extracellular	26.58	68.6
Zm00001d034505_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.93	60.7
CDY23767	Canola	extracellular	28.38	58.88
Zm00001d031942_P003	Maize	plastid	62.16	57.26
Zm00001d005468_P001	Maize	cytosol	61.26	53.75
Zm00001d019298_P002	Maize	cytosol	59.46	52.17
AT3G24890.2	Thale cress	cytosol	27.93	50.0
Zm00001d048443_P002	Maize	peroxisome	65.32	46.77
Zm00001d052756_P001	Maize	endoplasmic reticulum	34.23	39.38
Zm00001d018408_P001	Maize	cytosol	35.59	34.96
Zm00001d037483_P002	Maize	plasma membrane	38.74	33.86
PGSC0003DMT400043452	Potato	cytosol	53.15	31.98
Solyc12g098170.1.1	Tomato	cytosol	16.67	12.13

Protein Annotations

Gene3D:1.20.5.110	EntrezGene:100191650	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	UniProt:B4FQX6
EMBL:BT039514	EMBL:BT039737	EMBL:BT063740	ncoils:Coil	EMBL:EU956309	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:IPR001388
InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	ProteinID:ONM27538.1	ProteinID:ONM27539.1	PFAM:PF00957
PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF92	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI00017B74E0	EnsemblPlantsGene:Zm00001d007767	EnsemblPlants:Zm00001d007767_P001	EnsemblPlants:Zm00001d007767_T001	SEG:seg	:

Description

Vesicle-associated membrane protein 722

Coordinates

chr2:-:239274356..239277967

Molecular Weight (calculated)

24881.4 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.085

Length

222 amino acids

Sequence
(BLAST)

001: MGQQSLIYAF VARGTVVLAE YTEFTGNFTT IAAQCLQKLP ASNNKFTYNC DGHTFNYLVE DGFTYCVVAV ESVGRQIPIA FLDRVKEDFT KKYGGGKAAT
101: AAANSLNREF GSKLKEHMQY CVDHPEEVSK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRQQG TKVRRKMWLQ NMKIKLIVLG
201: IIIALILIII LSVCHGFKCG SK

Best Arabidopsis Sequence Match ( AT2G32670.1 )
(BLAST)

001: MDRSVVPISL APFQFLLVFW IFLTSVHTNP NKQQKTVVSL SLWWNSKNRI RGCVWFFFLL RVTRTMGQQN LIYSFVARGT VILVEYTEFK GNFTAVAAQC
101: LQKLPSSNNK FTYNCDGHTF NYLVENGFTY CVVAVESVGR QIPMAFLERV KEDFNKRYGG GKATTAQANS LNREFGSKLK EHMQYCVDHP DEISKLAKVK
201: AQVTEVKGVM MENIEKVLDR GEKIELLVDK TENLRSQAQD FRTQGTKIRR KMWFENMKIK LIVLGIIITL ILIIILSVCG GFKCT

Arabidopsis Description

VAMP725Vesicle-associated membrane protein 725 [Source:UniProtKB/Swiss-Prot;Acc:O48850]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.