Factsheet for Bra021828.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 1
nucleus 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	98.17	98.17
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	69.41	91.02
Bra005523.1-P	Field mustard	cytosol, extracellular	87.21	85.65
Bra022926.1-P	Field mustard	endoplasmic reticulum	86.3	85.14
Bra015345.1-P	Field mustard	endoplasmic reticulum	84.47	84.09
Bra030588.1-P	Field mustard	endoplasmic reticulum	82.19	82.19
Bra032493.1-P	Field mustard	cytosol	82.19	81.82
Bra022893.1-P	Field mustard	cytosol	80.37	80.0
Bra005568.1-P	Field mustard	cytosol	79.45	79.09
GSMUA_Achr7P01760_001	Banana	plasma membrane	78.08	78.08
VIT_05s0136g00290.t01	Wine grape	extracellular	78.08	77.73
Bra021804.1-P	Field mustard	cytosol	78.08	77.73
AT2G33110.1	Thale cress	extracellular, golgi	76.71	77.42
Os07t0194000-01	Rice	plasma membrane	77.17	76.82
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	76.71	76.71
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	76.26	76.26
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	76.26	76.26
Zm00001d007767_P001	Maize	extracellular	76.26	75.23
EER96027	Sorghum	extracellular	76.26	75.23
Os03t0803000-01	Rice	plasma membrane	75.34	75.0
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.34	75.0
GSMUA_Achr9P11030_001	Banana	cytosol	74.89	74.89
GSMUA_Achr2P17740_001	Banana	cytosol	73.52	73.52
TraesCS5B01G457700.1	Wheat	vacuole	73.52	72.52
TraesCS5D01G459900.1	Wheat	vacuole	73.52	72.52
TraesCS5A01G449900.1	Wheat	unclear	73.52	72.2
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.52	72.2
Zm00001d013055_P002	Maize	extracellular, plasma membrane	69.86	64.83
Bra033511.1-P	Field mustard	cytosol	64.84	63.96
Zm00001d019091_P002	Maize	vacuole	75.34	63.22
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.19	60.91
Bra014823.1-P	Field mustard	golgi	54.79	49.59
Bra003177.1-P	Field mustard	cytosol	54.34	49.38
Bra007063.1-P	Field mustard	cytosol, plasma membrane	53.42	48.75
Bra038066.1-P	Field mustard	cytosol	44.75	48.51
Bra040067.1-P	Field mustard	endoplasmic reticulum, plasma membrane	37.44	37.44
Bra008987.1-P	Field mustard	mitochondrion	36.53	36.2
Bra006623.1-P	Field mustard	endoplasmic reticulum, plasma membrane	36.07	35.75
Bra020187.1-P	Field mustard	endoplasmic reticulum	35.16	34.84
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.47	31.03
PGSC0003DMT400043452	Potato	cytosol	47.03	27.91
Bra011325.1-P	Field mustard	endoplasmic reticulum	34.25	20.55
Solyc12g098170.1.1	Tomato	cytosol	15.98	11.48

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	EnsemblPlantsGene:Bra021828	EnsemblPlants:Bra021828.1
EnsemblPlants:Bra021828.1-P	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	UniProt:M4DZ81
PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	PFscan:PS50859	PFscan:PS50892	PANTHER:PTHR21136
PANTHER:PTHR21136:SF120	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin	TMHMM:TMhelix
UniParc:UPI00025452CD	SEG:seg	:	:	:	:

Description

AT2G33120 (E=1e-099) SAR1, VAMP722, ATVAMP722 | SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)

Coordinates

chrA04:-:14747735..14749289

Molecular Weight (calculated)

24624.0 Da

IEP (calculated)

8.562

GRAVY (calculated)

-0.006

Length

219 amino acids

Sequence
(BLAST)

001: MAQQSLIYSF VARGTVILVD FTDFKGNFTS IAAQCLQKLP SSNNKVIYNC DGHTFNYLVE NGFTYCVVAV DSAGREIPMA FLERVKEDFN TRYGGGKAAT
101: AQPNSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VRGVLIENID KLYDRGVKIE ILVEKTADLR SQADVYRTQG DQIKKKMWFQ NMKIKLIFLA
201: IIIALILIII LSVCGGFNC

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.