Factsheet for GSMUA_Achr9P11030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	95.89	95.89
GSMUA_Achr9P25440_001	Banana	cytosol, vacuole	94.52	94.52
Os07t0194000-01	Rice	plasma membrane	92.69	92.27
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	91.78	91.78
VIT_05s0136g00290.t01	Wine grape	extracellular	91.78	91.36
Zm00001d007767_P001	Maize	extracellular	91.78	90.54
EER96027	Sorghum	extracellular	91.78	90.54
GSMUA_Achr7P01760_001	Banana	plasma membrane	90.41	90.41
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.41	90.0
Os03t0803000-01	Rice	plasma membrane	89.95	89.55
GSMUA_Achr2P17740_001	Banana	cytosol	88.13	88.13
Bra015345.1-P	Field mustard	endoplasmic reticulum	88.13	87.73
CDX89793	Canola	endoplasmic reticulum	88.13	87.73
CDY18254	Canola	endoplasmic reticulum	88.13	87.73
CDX86608	Canola	endoplasmic reticulum	87.67	87.67
Bra022893.1-P	Field mustard	cytosol	86.76	86.36
CDX84731	Canola	cytosol	86.76	86.36
CDY15521	Canola	endoplasmic reticulum	86.3	86.3
CDY12188	Canola	cytosol	86.3	85.91
Bra005568.1-P	Field mustard	cytosol	86.3	85.91
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	86.3	85.91
Bra032493.1-P	Field mustard	cytosol	85.84	85.45
CDY06150	Canola	cytosol	85.39	85.0
Bra030588.1-P	Field mustard	endoplasmic reticulum	84.93	84.93
Bra005523.1-P	Field mustard	cytosol, extracellular	86.3	84.75
CDY17139	Canola	cytosol, extracellular	86.3	84.75
TraesCS5B01G457700.1	Wheat	vacuole	85.84	84.68
TraesCS5D01G459900.1	Wheat	vacuole	85.84	84.68
CDY10053	Canola	endoplasmic reticulum	84.93	84.55
CDY19450	Canola	cytosol, extracellular	85.84	84.3
TraesCS5A01G449900.1	Wheat	unclear	85.84	84.3
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.84	84.3
CDX84702	Canola	endoplasmic reticulum	85.39	84.23
CDX79510	Canola	endoplasmic reticulum	85.39	84.23
Bra022926.1-P	Field mustard	endoplasmic reticulum	85.39	84.23
CDY19154	Canola	cytosol	84.02	83.64
Bra021804.1-P	Field mustard	cytosol	83.56	83.18
CDY48531	Canola	cytosol	82.19	81.82
CDX79466	Canola	endoplasmic reticulum	63.93	79.55
CDY59643	Canola	extracellular	26.48	78.38
Zm00001d019091_P002	Maize	vacuole	90.87	76.25
Zm00001d013055_P002	Maize	extracellular, plasma membrane	81.74	75.85
CDY19156	Canola	cytosol	49.77	75.69
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	74.89	74.89
CDY59642	Canola	endoplasmic reticulum	60.73	74.72
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	74.43	74.43
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	73.06	72.73
CDX79465	Canola	extracellular	27.4	69.77
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	51.6	67.66
CDY23767	Canola	extracellular	29.68	60.75
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.93	58.82
GSMUA_Achr9P30970_001	Banana	cytosol	60.73	58.33
AT3G24890.2	Thale cress	cytosol	28.31	50.0
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	37.44	37.27
GSMUA_Achr6P35140_001	Banana	plasma membrane	36.99	36.82
GSMUA_Achr11P...	Banana	endoplasmic reticulum	35.62	35.78
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.06	35.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	34.25	34.4
PGSC0003DMT400043452	Potato	cytosol	52.51	31.17
Solyc12g098170.1.1	Tomato	cytosol	16.44	11.8

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	ncoils:Coil	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr9G11030_001
EnsemblPlants:GSMUA_Achr9P11030_001	EnsemblPlants:GSMUA_Achr9T11030_001	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom
UniProt:M0TZB2	PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859
PFscan:PS50892	PANTHER:PTHR21136	PANTHER:PTHR21136:SF92	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356
InterPro:Synaptobrevin	TMHMM:TMhelix	UniParc:UPI000296E809	SEG:seg	:	:

Description

Putative vesicle-associated membrane protein 726 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11030_001]

Coordinates

chr9:+:7159782..7163353

Molecular Weight (calculated)

24669.1 Da

IEP (calculated)

8.969

GRAVY (calculated)

-0.139

Length

219 amino acids

Sequence
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFSGNFNS IAAQCLQKLP ASNNKFTYNC DGHTFNYLVE DGYTYCVVAV ESVGRQIPIG FLDRVKEDFN KRYGGGKAAT
101: ASANSLSREF GSKLKEQMQY CVDHSEEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRQQG TKMRRKMWLQ NMKVKLIVLG
201: IIIALILIIV LSICHGFKC

Best Arabidopsis Sequence Match ( AT1G04760.2 )
(BLAST)

001: MGQQSLIYSF VARGTVILAE YTEFKGNFTS VAAQCLQKLP SSNNKFTYNC DGHTFNYLAD NGFTYCVVVI ESAGRQIPMA FLERVKEDFN KRYGGGKAST
101: AKANSLNKEF GSKLKEHMQY CADHPEEISK LSKVKAQVTE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TKMKRKLWFE NMKIKLIVFG
201: IIVALILIII LSVCHGFKCT

Arabidopsis Description

VAMP726Putative vesicle-associated membrane protein 726 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAS5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.