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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:extracellular
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005523.1-P Field mustard cytosol, extracellular 99.55 99.55
CDY17139 Canola cytosol, extracellular 99.55 99.55
CDX84702 Canola endoplasmic reticulum 97.31 97.75
CDX79510 Canola endoplasmic reticulum 97.31 97.75
CDY18254 Canola endoplasmic reticulum 94.62 95.91
CDX89793 Canola endoplasmic reticulum 94.62 95.91
CDX86608 Canola endoplasmic reticulum 93.27 94.98
CDY15521 Canola endoplasmic reticulum 92.83 94.52
AT2G33120.2 Thale cress golgi 96.41 93.89
CDY10053 Canola endoplasmic reticulum 92.38 93.64
CDY06150 Canola cytosol 91.93 93.18
VIT_05s0136g00290.t01 Wine grape extracellular 88.79 90.0
GSMUA_Achr7P01760_001 Banana plasma membrane 86.1 87.67
GSMUA_Achr9P25440_001 Banana cytosol, vacuole 86.1 87.67
CDX84731 Canola cytosol 86.1 87.27
CDY12188 Canola cytosol 86.1 87.27
GSMUA_Achr8P15290_001 Banana cytosol, endoplasmic reticulum 85.65 87.21
Os07t0194000-01 Rice plasma membrane 85.2 86.36
GSMUA_Achr4P22260_001 Banana cytosol, extracellular 84.75 86.3
CDY37751 Canola endoplasmic reticulum, extracellular, plasma membrane 84.75 86.3
GSMUA_Achr9P11030_001 Banana cytosol 84.3 85.84
CDY19154 Canola cytosol 84.3 85.45
Os03t0803000-01 Rice plasma membrane 84.3 85.45
EER96027 Sorghum extracellular 84.75 85.14
Zm00001d007767_P001 Maize extracellular 84.75 85.14
OQU90815 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 83.41 84.55
CDY48531 Canola cytosol 82.51 83.64
GSMUA_Achr2P17740_001 Banana cytosol 82.06 83.56
TraesCS5D01G459900.1 Wheat vacuole 82.51 82.88
TraesCS5B01G457700.1 Wheat vacuole 82.51 82.88
TraesCS5A01G449900.1 Wheat unclear 82.51 82.51
HORVU5Hr1G107510.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 82.51 82.51
CDY59643 Canola extracellular 26.46 79.73
CDY19156 Canola cytosol 51.12 79.17
CDY23768 Canola endoplasmic reticulum, extracellular, plasma membrane 59.19 79.04
CDX79466 Canola endoplasmic reticulum 61.88 78.41
CDY59642 Canola endoplasmic reticulum 60.99 76.4
CDY48527 Canola cytosol 23.77 73.61
Zm00001d019091_P002 Maize vacuole 83.86 71.65
Zm00001d013055_P002 Maize extracellular, plasma membrane 74.89 70.76
CDY22900 Canola cytosol, plasma membrane, plastid 69.51 69.82
CDX79465 Canola extracellular 26.91 69.77
CDY44179 Canola cytosol 69.06 69.37
GSMUA_Achr8P03260_001 Banana cytosol, mitochondrion, plasma membrane, plastid 66.37 67.27
CDY23767 Canola extracellular 31.39 65.42
CDX67594 Canola cytosol 60.54 56.02
CDY07551 Canola cytosol 60.09 55.83
CDX76153 Canola cytosol 60.54 55.79
CDX78228 Canola cytosol, plasma membrane 59.19 55.0
CDY22757 Canola cytosol 49.33 54.46
CDX73490 Canola plasma membrane 58.74 54.36
CDY13199 Canola plasma membrane 46.64 52.26
CDY61387 Canola endoplasmic reticulum, plasma membrane 38.56 39.27
CDX70999 Canola endoplasmic reticulum 38.56 38.91
CDX69781 Canola plasma membrane 38.56 38.91
CDX75224 Canola endoplasmic reticulum, plasma membrane 38.12 38.64
CDX88799 Canola plasma membrane 37.67 38.01
CDX97084 Canola plasma membrane 37.67 38.01
CDX68821 Canola endoplasmic reticulum, plasma membrane 37.22 37.73
CDY09133 Canola endoplasmic reticulum 36.77 37.1
TraesCS3B01G193500.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.96 34.82
PGSC0003DMT400043452 Potato cytosol 51.12 30.89
Solyc12g098170.1.1 Tomato cytosol 15.7 11.48
Protein Annotations
Gene3D:1.20.5.110MapMan:13.4.2.3.4MapMan:22.7.5.1Gene3D:3.30.450.50GO:A0A078FYJ6UniProt:A0A078FYJ6
EnsemblPlants:CDY19450ProteinID:CDY19450ProteinID:CDY19450.1GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016192EnsemblPlantsGene:GSBRNA2T00009019001InterPro:IPR001388InterPro:IPR010908
InterPro:Longin-like_dom_sfInterPro:Longin_domPFAM:PF00957PFAM:PF13774PRINTS:PR00219ScanProsite:PS00417
PFscan:PS50859PFscan:PS50892PANTHER:PTHR21136PANTHER:PTHR21136:SF92SMART:SM01270SUPFAM:SSF58038
SUPFAM:SSF64356InterPro:SynaptobrevinTMHMM:TMhelixUniParc:UPI0001CAB6FFSEG:seg:
Description
BnaC04g11490DBnaC04g11490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYJ6]
Coordinates
chrLK032096:-:222712..224491
Molecular Weight (calculated)
25143.7 Da
IEP (calculated)
9.208
GRAVY (calculated)
-0.155
Length
223 amino acids
Sequence
(BLAST)
001: MAQQQQSLIY SFVARGTVIL VEFTDFKGNF TSIAAQCLQK LPSSNNKFTY NCDGHTFNYL VENGFTYCVV AVDSAGRQIP MAFLERVKDD FNKRYGGGKA
101: ATAQANSLNK EFGSKLKEHM QYCMDHPDEI SKLAKVKAQV SEVKGVMMEN IEKVLDRGEK IELLVDKTEN LRSQAQDFRT QGTQMRRKMW FQNMKIKLIV
201: LAIIIALILI IVLSVCGGFN CGK
Best Arabidopsis Sequence Match ( AT2G33120.1 )
(BLAST)
001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE NGFTYCVVAV DSAGRQIPMA FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTQG TQMRRKMWFQ NMKIKLIVLA
201: IIIALILIII LSICGGFNCG K
Arabidopsis Description
SAR1AT2G33120 protein [Source:UniProtKB/TrEMBL;Acc:B9DH97]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.