Factsheet for GSMUA_Achr9P25440_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

plastid 1
nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15290_001	Banana	cytosol, endoplasmic reticulum	94.98	94.98
GSMUA_Achr9P11030_001	Banana	cytosol	94.52	94.52
Os07t0194000-01	Rice	plasma membrane	93.15	92.73
Zm00001d007767_P001	Maize	extracellular	92.24	90.99
EER96027	Sorghum	extracellular	92.24	90.99
GSMUA_Achr4P22260_001	Banana	cytosol, extracellular	90.87	90.87
VIT_05s0136g00290.t01	Wine grape	extracellular	90.87	90.45
Os03t0803000-01	Rice	plasma membrane	90.87	90.45
GSMUA_Achr7P01760_001	Banana	plasma membrane	90.41	90.41
Bra015345.1-P	Field mustard	endoplasmic reticulum	90.41	90.0
OQU90815	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.41	90.0
CDY18254	Canola	endoplasmic reticulum	90.41	90.0
CDX89793	Canola	endoplasmic reticulum	90.41	90.0
CDX86608	Canola	endoplasmic reticulum	89.95	89.95
GSMUA_Achr2P17740_001	Banana	cytosol	89.04	89.04
CDY15521	Canola	endoplasmic reticulum	88.58	88.58
Bra032493.1-P	Field mustard	cytosol	88.13	87.73
CDY06150	Canola	cytosol	87.67	87.27
CDY10053	Canola	endoplasmic reticulum	87.67	87.27
Bra030588.1-P	Field mustard	endoplasmic reticulum	87.21	87.21
Bra005523.1-P	Field mustard	cytosol, extracellular	88.13	86.55
CDY17139	Canola	cytosol, extracellular	88.13	86.55
TraesCS5D01G459900.1	Wheat	vacuole	87.67	86.49
TraesCS5B01G457700.1	Wheat	vacuole	87.67	86.49
CDX84731	Canola	cytosol	86.76	86.36
Bra022893.1-P	Field mustard	cytosol	86.76	86.36
CDY19450	Canola	cytosol, extracellular	87.67	86.1
TraesCS5A01G449900.1	Wheat	unclear	87.67	86.1
HORVU5Hr1G107510.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.67	86.1
CDX84702	Canola	endoplasmic reticulum	87.21	86.04
Bra022926.1-P	Field mustard	endoplasmic reticulum	87.21	86.04
CDX79510	Canola	endoplasmic reticulum	87.21	86.04
CDY12188	Canola	cytosol	86.3	85.91
Bra005568.1-P	Field mustard	cytosol	86.3	85.91
GSMUA_Achr6P04490_001	Banana	cytosol, extracellular	85.39	85.0
CDY19154	Canola	cytosol	84.02	83.64
Bra021804.1-P	Field mustard	cytosol	83.56	83.18
CDY48531	Canola	cytosol	82.19	81.82
CDX79466	Canola	endoplasmic reticulum	64.38	80.11
CDY59643	Canola	extracellular	26.03	77.03
Zm00001d019091_P002	Maize	vacuole	91.78	77.01
Bra021828.1-P	Field mustard	endoplasmic reticulum, extracellular	76.71	76.71
Zm00001d013055_P002	Maize	extracellular, plasma membrane	82.65	76.69
CDY19156	Canola	cytosol	50.23	76.39
CDY37751	Canola	endoplasmic reticulum, extracellular, plasma membrane	76.26	76.26
CDY59642	Canola	endoplasmic reticulum	61.64	75.84
GSMUA_Achr8P03260_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	72.15	71.82
CDY23768	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.88	70.66
CDX79465	Canola	extracellular	26.48	67.44
GSMUA_Achr9P30970_001	Banana	cytosol	62.56	60.09
GSMUA_Achr8P32930_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.3	60.08
CDY23767	Canola	extracellular	28.77	58.88
AT3G24890.2	Thale cress	cytosol	28.31	50.0
GSMUA_Achr9P09180_001	Banana	endoplasmic reticulum, plasma membrane	38.81	38.64
GSMUA_Achr6P35140_001	Banana	plasma membrane	38.36	38.18
GSMUA_Achr11P...	Banana	endoplasmic reticulum	36.53	36.7
TraesCS3B01G193500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.43	36.38
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	35.16	35.32
PGSC0003DMT400043452	Potato	cytosol	51.6	30.62
Solyc12g098170.1.1	Tomato	cytosol	15.53	11.15

Protein Annotations

Gene3D:1.20.5.110	MapMan:13.4.2.3.4	MapMan:22.7.5.1	Gene3D:3.30.450.50	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr9G25440_001	EnsemblPlants:GSMUA_Achr9P25440_001
EnsemblPlants:GSMUA_Achr9T25440_001	InterPro:IPR001388	InterPro:IPR010908	InterPro:Longin-like_dom_sf	InterPro:Longin_dom	UniProt:M0U3F1
PFAM:PF00957	PFAM:PF13774	PRINTS:PR00219	ScanProsite:PS00417	PFscan:PS50859	PFscan:PS50892
PANTHER:PTHR21136	PANTHER:PTHR21136:SF92	SMART:SM01270	SUPFAM:SSF58038	SUPFAM:SSF64356	InterPro:Synaptobrevin
TMHMM:TMhelix	UniParc:UPI0002957052	SEG:seg	:	:	:

Description

Vesicle-associated membrane protein 721 [Source:GMGC_GENE;Acc:GSMUA_Achr9G25440_001]

Coordinates

chr9:-:29947126..29950080

Molecular Weight (calculated)

24665.1 Da

IEP (calculated)

8.779

GRAVY (calculated)

-0.101

Length

219 amino acids

Sequence
(BLAST)

001: MGQQSLIYSF VARGTVVLAE FTEFSGNFNS IAAQCLQKLP ASNNKFTYNC DGHTFNYLVE DGYTYCVVAV ESVGRQIPIA FLERVKEDFN KRYGGGKAAT
101: AAANSLTREF GSKLKEHMQY CVDHPEEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRQHG TQMRRKMWLQ NMKVKLIVLG
201: IIIALVLIIV LSVCHGFKC

Best Arabidopsis Sequence Match ( AT1G04750.1 )
(BLAST)

001: MAQQSLIYSF VARGTVILVE FTDFKGNFTS IAAQCLQKLP SSNNKFTYNC DGHTFNYLVE DGFTYCVVAV DSAGRQIPMS FLERVKEDFN KRYGGGKAAT
101: AQANSLNKEF GSKLKEHMQY CMDHPDEISK LAKVKAQVSE VKGVMMENIE KVLDRGEKIE LLVDKTENLR SQAQDFRTTG TQMRRKMWLQ NMKIKLIVLA
201: IIIALILIIV LSVCHGFKC

Arabidopsis Description

VAMP721Putative vesicle-associated membrane protein, synaptobrevin 7B [Source:UniProtKB/TrEMBL;Acc:Q681L9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.